Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SURF4O15260 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.6■□□□□ 0.25
SURF4O15260 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SURF4O15260 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SURF4O15260 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SURF4O15260 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SURF4O15260 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SURF4O15260 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SURF4O15260 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SURF4O15260 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SURF4O15260 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SURF4O15260 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SURF4O15260 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
SURF4O15260 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.6■□□□□ 0.25
SURF4O15260 AC008622.2-201ENST00000617006 1229 ntBASIC16.6■□□□□ 0.25
SURF4O15260 CR392000.1-201ENST00000624770 1228 ntBASIC16.6■□□□□ 0.25
SURF4O15260 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SURF4O15260 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.6■□□□□ 0.25
SURF4O15260 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SURF4O15260 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SURF4O15260 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SURF4O15260 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SURF4O15260 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SURF4O15260 PHGDH-209ENST00000641074 1780 ntBASIC16.59■□□□□ 0.25
SURF4O15260 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.59■□□□□ 0.25
SURF4O15260 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SURF4O15260 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SURF4O15260 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.59■□□□□ 0.25
SURF4O15260 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SURF4O15260 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SURF4O15260 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SURF4O15260 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SURF4O15260 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SURF4O15260 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SURF4O15260 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.59■□□□□ 0.25
SURF4O15260 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.59■□□□□ 0.25
SURF4O15260 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SURF4O15260 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SURF4O15260 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.59■□□□□ 0.25
SURF4O15260 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SURF4O15260 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.59■□□□□ 0.25
SURF4O15260 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
SURF4O15260 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.59■□□□□ 0.25
SURF4O15260 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SURF4O15260 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SURF4O15260 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SURF4O15260 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
SURF4O15260 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SURF4O15260 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SURF4O15260 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.59■□□□□ 0.25
SURF4O15260 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SURF4O15260 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SURF4O15260 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SURF4O15260 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SURF4O15260 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SURF4O15260 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SURF4O15260 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SURF4O15260 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SURF4O15260 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SURF4O15260 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SURF4O15260 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SURF4O15260 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.58■□□□□ 0.25
SURF4O15260 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
SURF4O15260 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
SURF4O15260 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SURF4O15260 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SURF4O15260 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
SURF4O15260 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SURF4O15260 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SURF4O15260 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SURF4O15260 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SURF4O15260 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.58■□□□□ 0.24
SURF4O15260 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SURF4O15260 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SURF4O15260 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SURF4O15260 AC011506.1-201ENST00000474329 610 ntBASIC16.58■□□□□ 0.24
SURF4O15260 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SURF4O15260 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
SURF4O15260 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SURF4O15260 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.58■□□□□ 0.24
SURF4O15260 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SURF4O15260 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SURF4O15260 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SURF4O15260 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.58■□□□□ 0.24
SURF4O15260 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.58■□□□□ 0.24
SURF4O15260 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SURF4O15260 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SURF4O15260 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.58■□□□□ 0.24
SURF4O15260 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.58■□□□□ 0.24
SURF4O15260 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SURF4O15260 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
SURF4O15260 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.58■□□□□ 0.24
SURF4O15260 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SURF4O15260 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SURF4O15260 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SURF4O15260 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SURF4O15260 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SURF4O15260 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SURF4O15260 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.57■□□□□ 0.24
SURF4O15260 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms