Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TAF4O00268 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.96■□□□□ 0.47
TAF4O00268 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TAF4O00268 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TAF4O00268 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TAF4O00268 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
TAF4O00268 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.96■□□□□ 0.47
TAF4O00268 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TAF4O00268 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TAF4O00268 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.96■□□□□ 0.47
TAF4O00268 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.96■□□□□ 0.47
TAF4O00268 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TAF4O00268 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.96■□□□□ 0.47
TAF4O00268 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TAF4O00268 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TAF4O00268 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TAF4O00268 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TAF4O00268 TSPY22P-201ENST00000427496 604 ntBASIC17.96■□□□□ 0.47
TAF4O00268 TOB2P1-201ENST00000469761 992 ntBASIC17.96■□□□□ 0.47
TAF4O00268 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.96■□□□□ 0.47
TAF4O00268 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TAF4O00268 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.96■□□□□ 0.47
TAF4O00268 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TAF4O00268 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TAF4O00268 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TAF4O00268 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TAF4O00268 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TAF4O00268 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TAF4O00268 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TAF4O00268 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.96■□□□□ 0.47
TAF4O00268 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.96■□□□□ 0.47
TAF4O00268 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TAF4O00268 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
TAF4O00268 AC092720.2-201ENST00000602388 1665 ntBASIC17.96■□□□□ 0.47
TAF4O00268 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TAF4O00268 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TAF4O00268 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
TAF4O00268 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TAF4O00268 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TAF4O00268 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TAF4O00268 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TAF4O00268 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TAF4O00268 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TAF4O00268 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TAF4O00268 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TAF4O00268 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TAF4O00268 AKR1C7P-201ENST00000305623 895 ntBASIC17.95■□□□□ 0.46
TAF4O00268 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.95■□□□□ 0.46
TAF4O00268 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.95■□□□□ 0.46
TAF4O00268 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.95■□□□□ 0.46
TAF4O00268 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TAF4O00268 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.95■□□□□ 0.46
TAF4O00268 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TAF4O00268 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.95■□□□□ 0.46
TAF4O00268 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.95■□□□□ 0.46
TAF4O00268 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.95■□□□□ 0.46
TAF4O00268 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TAF4O00268 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TAF4O00268 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TAF4O00268 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TAF4O00268 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.95■□□□□ 0.46
TAF4O00268 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TAF4O00268 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.95■□□□□ 0.46
TAF4O00268 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.95■□□□□ 0.46
TAF4O00268 PHGDH-210ENST00000641115 1638 ntBASIC17.94■□□□□ 0.46
TAF4O00268 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TAF4O00268 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TAF4O00268 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TAF4O00268 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
TAF4O00268 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.94■□□□□ 0.46
TAF4O00268 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TAF4O00268 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TAF4O00268 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
TAF4O00268 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.94■□□□□ 0.46
TAF4O00268 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TAF4O00268 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.94■□□□□ 0.46
TAF4O00268 AC005104.2-201ENST00000427818 678 ntBASIC17.94■□□□□ 0.46
TAF4O00268 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.94■□□□□ 0.46
TAF4O00268 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.94■□□□□ 0.46
TAF4O00268 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.94■□□□□ 0.46
TAF4O00268 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.94■□□□□ 0.46
TAF4O00268 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
TAF4O00268 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TAF4O00268 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TAF4O00268 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TAF4O00268 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
TAF4O00268 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TAF4O00268 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.94■□□□□ 0.46
TAF4O00268 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TAF4O00268 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.94■□□□□ 0.46
TAF4O00268 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TAF4O00268 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TAF4O00268 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
TAF4O00268 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TAF4O00268 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TAF4O00268 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TAF4O00268 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TAF4O00268 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TAF4O00268 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.93■□□□□ 0.46
TAF4O00268 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms