Protein–RNA interactions for Protein: O00233

PSMD9, 26S proteasome non-ATPase regulatory subunit 9, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD9O00233 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PSMD9O00233 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PSMD9O00233 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PSMD9O00233 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PSMD9O00233 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PSMD9O00233 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PSMD9O00233 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PSMD9O00233 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.43■□□□□ 0.22
PSMD9O00233 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PSMD9O00233 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.43■□□□□ 0.22
PSMD9O00233 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PSMD9O00233 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.42■□□□□ 0.22
PSMD9O00233 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.42■□□□□ 0.22
PSMD9O00233 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD9O00233 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.42■□□□□ 0.22
PSMD9O00233 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.42■□□□□ 0.22
PSMD9O00233 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD9O00233 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD9O00233 REXO1L9P-201ENST00000604264 2108 ntBASIC16.42■□□□□ 0.22
PSMD9O00233 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD9O00233 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD9O00233 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD9O00233 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD9O00233 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD9O00233 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
PSMD9O00233 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD9O00233 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.42■□□□□ 0.22
PSMD9O00233 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PSMD9O00233 KSR1P1-201ENST00000446298 240 ntBASIC16.42■□□□□ 0.22
PSMD9O00233 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.42■□□□□ 0.22
PSMD9O00233 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.42■□□□□ 0.22
PSMD9O00233 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD9O00233 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD9O00233 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD9O00233 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.42■□□□□ 0.22
PSMD9O00233 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD9O00233 KRT16P1-201ENST00000399124 1418 ntBASIC16.42■□□□□ 0.22
PSMD9O00233 AC112777.1-201ENST00000540175 1423 ntBASIC16.42■□□□□ 0.22
PSMD9O00233 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD9O00233 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD9O00233 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PSMD9O00233 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD9O00233 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD9O00233 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD9O00233 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD9O00233 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PSMD9O00233 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PSMD9O00233 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PSMD9O00233 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PSMD9O00233 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PSMD9O00233 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
PSMD9O00233 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PSMD9O00233 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
PSMD9O00233 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.41■□□□□ 0.22
PSMD9O00233 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PSMD9O00233 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PSMD9O00233 AC012313.1-201ENST00000593393 3059 ntBASIC16.41■□□□□ 0.22
PSMD9O00233 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.41■□□□□ 0.22
PSMD9O00233 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PSMD9O00233 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PSMD9O00233 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PSMD9O00233 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PSMD9O00233 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.41■□□□□ 0.22
PSMD9O00233 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
PSMD9O00233 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PSMD9O00233 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PSMD9O00233 AC128676.1-201ENST00000454392 318 ntBASIC16.41■□□□□ 0.22
PSMD9O00233 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PSMD9O00233 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.41■□□□□ 0.22
PSMD9O00233 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PSMD9O00233 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PSMD9O00233 MYC-208ENST00000641036 567 ntBASIC16.41■□□□□ 0.22
PSMD9O00233 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PSMD9O00233 KRT8P45-201ENST00000414328 1447 ntBASIC16.41■□□□□ 0.22
PSMD9O00233 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.41■□□□□ 0.22
PSMD9O00233 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.41■□□□□ 0.22
PSMD9O00233 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.41■□□□□ 0.22
PSMD9O00233 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PSMD9O00233 AC093677.2-201ENST00000600169 1863 ntBASIC16.41■□□□□ 0.22
PSMD9O00233 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PSMD9O00233 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PSMD9O00233 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PSMD9O00233 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PSMD9O00233 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.41■□□□□ 0.22
PSMD9O00233 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PSMD9O00233 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PSMD9O00233 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PSMD9O00233 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PSMD9O00233 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PSMD9O00233 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.4■□□□□ 0.22
PSMD9O00233 AC008556.1-201ENST00000610908 2040 ntBASIC16.4■□□□□ 0.22
PSMD9O00233 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PSMD9O00233 AC134043.2-201ENST00000624206 2238 ntBASIC16.4■□□□□ 0.22
PSMD9O00233 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PSMD9O00233 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PSMD9O00233 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PSMD9O00233 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.4■□□□□ 0.22
PSMD9O00233 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.4■□□□□ 0.22
PSMD9O00233 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.4■□□□□ 0.22
PSMD9O00233 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms