Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC01558Q9Y6Z2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
LINC01558Q9Y6Z2 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC01558Q9Y6Z2 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC01558Q9Y6Z2 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
LINC01558Q9Y6Z2 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 AL009178.2-201ENST00000597278 2719 ntBASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
LINC01558Q9Y6Z2 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LINC01558Q9Y6Z2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC9.5□□□□□ -0.89
LINC01558Q9Y6Z2 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
LINC01558Q9Y6Z2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LINC01558Q9Y6Z2 AL122018.1-201ENST00000446607 2310 ntBASIC9.5□□□□□ -0.89
LINC01558Q9Y6Z2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LINC01558Q9Y6Z2 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
LINC01558Q9Y6Z2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
LINC01558Q9Y6Z2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LINC01558Q9Y6Z2 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC9.5□□□□□ -0.89
LINC01558Q9Y6Z2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC9.5□□□□□ -0.89
LINC01558Q9Y6Z2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LINC01558Q9Y6Z2 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC9.5□□□□□ -0.89
LINC01558Q9Y6Z2 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LINC01558Q9Y6Z2 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC9.5□□□□□ -0.89
LINC01558Q9Y6Z2 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LINC01558Q9Y6Z2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
LINC01558Q9Y6Z2 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC9.5□□□□□ -0.89
LINC01558Q9Y6Z2 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
LINC01558Q9Y6Z2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
LINC01558Q9Y6Z2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LINC01558Q9Y6Z2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LINC01558Q9Y6Z2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC9.5□□□□□ -0.89
LINC01558Q9Y6Z2 CASK-202ENST00000378158 3848 ntTSL 5 BASIC9.5□□□□□ -0.89
LINC01558Q9Y6Z2 HES6-205ENST00000409356 528 ntTSL 2 BASIC9.5□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms