Protein–RNA interactions for Protein: Q9Y5U5

TNFRSF18, Tumor necrosis factor receptor superfamily member 18, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18Q9Y5U5 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TNFRSF18Q9Y5U5 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TNFRSF18Q9Y5U5 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC13.4□□□□□ -0.26
TNFRSF18Q9Y5U5 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC13.4□□□□□ -0.26
TNFRSF18Q9Y5U5 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC13.4□□□□□ -0.26
TNFRSF18Q9Y5U5 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.4□□□□□ -0.26
TNFRSF18Q9Y5U5 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC13.4□□□□□ -0.26
TNFRSF18Q9Y5U5 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TNFRSF18Q9Y5U5 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TNFRSF18Q9Y5U5 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TNFRSF18Q9Y5U5 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
TNFRSF18Q9Y5U5 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TNFRSF18Q9Y5U5 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TNFRSF18Q9Y5U5 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TNFRSF18Q9Y5U5 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC13.4□□□□□ -0.26
TNFRSF18Q9Y5U5 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TNFRSF18Q9Y5U5 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC13.4□□□□□ -0.26
TNFRSF18Q9Y5U5 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TNFRSF18Q9Y5U5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TNFRSF18Q9Y5U5 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC13.4□□□□□ -0.26
TNFRSF18Q9Y5U5 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TNFRSF18Q9Y5U5 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TNFRSF18Q9Y5U5 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TNFRSF18Q9Y5U5 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TNFRSF18Q9Y5U5 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC13.4□□□□□ -0.26
TNFRSF18Q9Y5U5 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
TNFRSF18Q9Y5U5 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.27
TNFRSF18Q9Y5U5 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
TNFRSF18Q9Y5U5 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 Six3os1_6.1-201ENST00000620790 196 ntBASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 AC005332.8-201ENST00000622750 2735 ntBASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 AC073592.3-201ENST00000625118 1834 ntBASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.39□□□□□ -0.27
TNFRSF18Q9Y5U5 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFRSF18Q9Y5U5 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFRSF18Q9Y5U5 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFRSF18Q9Y5U5 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFRSF18Q9Y5U5 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFRSF18Q9Y5U5 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFRSF18Q9Y5U5 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TNFRSF18Q9Y5U5 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFRSF18Q9Y5U5 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.38□□□□□ -0.27
TNFRSF18Q9Y5U5 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TNFRSF18Q9Y5U5 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TNFRSF18Q9Y5U5 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFRSF18Q9Y5U5 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.38□□□□□ -0.27
TNFRSF18Q9Y5U5 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TNFRSF18Q9Y5U5 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.38□□□□□ -0.27
TNFRSF18Q9Y5U5 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFRSF18Q9Y5U5 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
TNFRSF18Q9Y5U5 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TNFRSF18Q9Y5U5 NBPF21P-201ENST00000425093 1451 ntBASIC13.38□□□□□ -0.27
TNFRSF18Q9Y5U5 KATNBL1P6-202ENST00000562413 1466 ntBASIC13.38□□□□□ -0.27
TNFRSF18Q9Y5U5 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFRSF18Q9Y5U5 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFRSF18Q9Y5U5 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFRSF18Q9Y5U5 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFRSF18Q9Y5U5 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TNFRSF18Q9Y5U5 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms