Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA7Q9Y5G6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA7Q9Y5G6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA7Q9Y5G6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PCDHGA7Q9Y5G6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGA7Q9Y5G6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA7Q9Y5G6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA7Q9Y5G6 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGA7Q9Y5G6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA7Q9Y5G6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA7Q9Y5G6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA7Q9Y5G6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA7Q9Y5G6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA7Q9Y5G6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDHGA7Q9Y5G6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.24■□□□□ 0.51
PCDHGA7Q9Y5G6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA7Q9Y5G6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDHGA7Q9Y5G6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA7Q9Y5G6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA7Q9Y5G6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA7Q9Y5G6 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGA7Q9Y5G6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDHGA7Q9Y5G6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA7Q9Y5G6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA7Q9Y5G6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 KRT8P41-201ENST00000533985 1514 ntBASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 HCG4P8-203ENST00000443049 980 ntBASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 AC083906.6-201ENST00000641366 219 ntBASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 KRT8P45-201ENST00000414328 1447 ntBASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA7Q9Y5G6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PCDHGA7Q9Y5G6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGA7Q9Y5G6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGA7Q9Y5G6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHGA7Q9Y5G6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA7Q9Y5G6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA7Q9Y5G6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA7Q9Y5G6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA7Q9Y5G6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA7Q9Y5G6 KRT18P38-201ENST00000449496 1282 ntBASIC18.22■□□□□ 0.51
PCDHGA7Q9Y5G6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHGA7Q9Y5G6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHGA7Q9Y5G6 VENTXP5-201ENST00000523979 775 ntBASIC18.22■□□□□ 0.51
PCDHGA7Q9Y5G6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA7Q9Y5G6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGA7Q9Y5G6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGA7Q9Y5G6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA7Q9Y5G6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA7Q9Y5G6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHGA7Q9Y5G6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA7Q9Y5G6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA7Q9Y5G6 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA7Q9Y5G6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHGA7Q9Y5G6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA7Q9Y5G6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA7Q9Y5G6 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGA7Q9Y5G6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA7Q9Y5G6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PCDHGA7Q9Y5G6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHGA7Q9Y5G6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHGA7Q9Y5G6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA7Q9Y5G6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms