Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 AC093525.10-201ENST00000625130 1569 ntBASIC15.71■□□□□ 0.11
GCM1Q9NP62 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
GCM1Q9NP62 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GCM1Q9NP62 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GCM1Q9NP62 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GCM1Q9NP62 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GCM1Q9NP62 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
GCM1Q9NP62 CROCCP3-202ENST00000420820 1947 ntBASIC15.71■□□□□ 0.11
GCM1Q9NP62 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GCM1Q9NP62 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
GCM1Q9NP62 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GCM1Q9NP62 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
GCM1Q9NP62 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.71■□□□□ 0.11
GCM1Q9NP62 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.71■□□□□ 0.11
GCM1Q9NP62 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.71■□□□□ 0.11
GCM1Q9NP62 GCSHP2-201ENST00000560971 527 ntBASIC15.71■□□□□ 0.11
GCM1Q9NP62 AL049597.2-201ENST00000565575 961 ntBASIC15.71■□□□□ 0.11
GCM1Q9NP62 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
GCM1Q9NP62 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
GCM1Q9NP62 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
GCM1Q9NP62 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GCM1Q9NP62 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
GCM1Q9NP62 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
GCM1Q9NP62 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GCM1Q9NP62 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
GCM1Q9NP62 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
GCM1Q9NP62 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.71■□□□□ 0.1
GCM1Q9NP62 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
GCM1Q9NP62 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GCM1Q9NP62 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
GCM1Q9NP62 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GCM1Q9NP62 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
GCM1Q9NP62 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GCM1Q9NP62 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.7■□□□□ 0.1
GCM1Q9NP62 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
GCM1Q9NP62 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.7■□□□□ 0.1
GCM1Q9NP62 KRT18P41-201ENST00000518924 1277 ntBASIC15.7■□□□□ 0.1
GCM1Q9NP62 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.7■□□□□ 0.1
GCM1Q9NP62 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.7■□□□□ 0.1
GCM1Q9NP62 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GCM1Q9NP62 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.7■□□□□ 0.1
GCM1Q9NP62 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.7■□□□□ 0.1
GCM1Q9NP62 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GCM1Q9NP62 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.7■□□□□ 0.1
GCM1Q9NP62 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.7■□□□□ 0.1
GCM1Q9NP62 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.7■□□□□ 0.1
GCM1Q9NP62 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GCM1Q9NP62 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
GCM1Q9NP62 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
GCM1Q9NP62 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GCM1Q9NP62 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
GCM1Q9NP62 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.7■□□□□ 0.1
GCM1Q9NP62 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
GCM1Q9NP62 AL031598.1-201ENST00000561511 1773 ntBASIC15.7■□□□□ 0.1
GCM1Q9NP62 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GCM1Q9NP62 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GCM1Q9NP62 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.69■□□□□ 0.1
GCM1Q9NP62 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
GCM1Q9NP62 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
GCM1Q9NP62 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.69■□□□□ 0.1
GCM1Q9NP62 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
GCM1Q9NP62 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.69■□□□□ 0.1
GCM1Q9NP62 ANO7L1-203ENST00000602586 1720 ntBASIC15.69■□□□□ 0.1
GCM1Q9NP62 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GCM1Q9NP62 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.69■□□□□ 0.1
GCM1Q9NP62 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
GCM1Q9NP62 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
GCM1Q9NP62 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GCM1Q9NP62 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GCM1Q9NP62 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
GCM1Q9NP62 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
GCM1Q9NP62 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GCM1Q9NP62 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GCM1Q9NP62 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GCM1Q9NP62 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.69■□□□□ 0.1
GCM1Q9NP62 SEC1P-202ENST00000473944 940 ntBASIC15.69■□□□□ 0.1
GCM1Q9NP62 AC063952.2-201ENST00000498792 1227 ntBASIC15.69■□□□□ 0.1
GCM1Q9NP62 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.69■□□□□ 0.1
GCM1Q9NP62 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GCM1Q9NP62 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.69■□□□□ 0.1
GCM1Q9NP62 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.69■□□□□ 0.1
GCM1Q9NP62 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.69■□□□□ 0.1
GCM1Q9NP62 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GCM1Q9NP62 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.69■□□□□ 0.1
GCM1Q9NP62 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GCM1Q9NP62 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GCM1Q9NP62 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GCM1Q9NP62 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GCM1Q9NP62 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GCM1Q9NP62 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GCM1Q9NP62 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GCM1Q9NP62 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
GCM1Q9NP62 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
GCM1Q9NP62 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GCM1Q9NP62 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GCM1Q9NP62 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
GCM1Q9NP62 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
GCM1Q9NP62 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GCM1Q9NP62 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
GCM1Q9NP62 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms