Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 AL031598.1-201ENST00000561511 1773 ntBASIC12.83□□□□□ -0.36
VPS25Q9BRG1 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VPS25Q9BRG1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 REST-206ENST00000612429 1376 ntTSL 5 BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 REST-207ENST00000616975 1370 ntTSL 5 BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 FP325331.1-202ENST00000623531 1380 ntBASIC12.82□□□□□ -0.36
VPS25Q9BRG1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 MIR6765-201ENST00000614092 87 ntBASIC12.82□□□□□ -0.36
VPS25Q9BRG1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS25Q9BRG1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC12.81□□□□□ -0.36
VPS25Q9BRG1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC12.81□□□□□ -0.36
VPS25Q9BRG1 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VPS25Q9BRG1 AP002414.2-201ENST00000591780 3365 ntBASIC12.81□□□□□ -0.36
VPS25Q9BRG1 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS25Q9BRG1 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
VPS25Q9BRG1 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VPS25Q9BRG1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VPS25Q9BRG1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
VPS25Q9BRG1 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS25Q9BRG1 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS25Q9BRG1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
VPS25Q9BRG1 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VPS25Q9BRG1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS25Q9BRG1 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
VPS25Q9BRG1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC12.81□□□□□ -0.36
VPS25Q9BRG1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC12.81□□□□□ -0.36
VPS25Q9BRG1 AC105917.1-201ENST00000506637 2539 ntBASIC12.81□□□□□ -0.36
VPS25Q9BRG1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS25Q9BRG1 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS25Q9BRG1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC12.81□□□□□ -0.36
VPS25Q9BRG1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC12.81□□□□□ -0.36
VPS25Q9BRG1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
VPS25Q9BRG1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS25Q9BRG1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC12.81□□□□□ -0.36
VPS25Q9BRG1 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms