Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.19■□□□□ 0.5
CCNYL1Q8N7R7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 AC130371.2-201ENST00000619443 611 ntBASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCNYL1Q8N7R7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 AC128676.1-201ENST00000454392 318 ntBASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 AC011506.1-201ENST00000474329 610 ntBASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 AC026271.3-201ENST00000571884 352 ntBASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.17■□□□□ 0.5
CCNYL1Q8N7R7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 AC138028.4-201ENST00000564984 1845 ntBASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 AC134043.2-201ENST00000624206 2238 ntBASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCNYL1Q8N7R7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.15■□□□□ 0.5
CCNYL1Q8N7R7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms