Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PACS1Q6VY07 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PACS1Q6VY07 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.59■□□□□ 0.57
PACS1Q6VY07 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PACS1Q6VY07 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PACS1Q6VY07 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.59■□□□□ 0.57
PACS1Q6VY07 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PACS1Q6VY07 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PACS1Q6VY07 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PACS1Q6VY07 KRT8P9-201ENST00000558927 1449 ntBASIC18.58■□□□□ 0.57
PACS1Q6VY07 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.58■□□□□ 0.57
PACS1Q6VY07 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.58■□□□□ 0.57
PACS1Q6VY07 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PACS1Q6VY07 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.58■□□□□ 0.57
PACS1Q6VY07 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PACS1Q6VY07 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PACS1Q6VY07 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PACS1Q6VY07 KRT18P41-201ENST00000518924 1277 ntBASIC18.58■□□□□ 0.56
PACS1Q6VY07 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PACS1Q6VY07 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.58■□□□□ 0.56
PACS1Q6VY07 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.58■□□□□ 0.56
PACS1Q6VY07 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.58■□□□□ 0.56
PACS1Q6VY07 AC010947.1-201ENST00000623454 693 ntBASIC18.58■□□□□ 0.56
PACS1Q6VY07 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.58■□□□□ 0.56
PACS1Q6VY07 AC116562.4-202ENST00000641738 218 ntBASIC18.58■□□□□ 0.56
PACS1Q6VY07 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.58■□□□□ 0.56
PACS1Q6VY07 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PACS1Q6VY07 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PACS1Q6VY07 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PACS1Q6VY07 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
PACS1Q6VY07 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.58■□□□□ 0.56
PACS1Q6VY07 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PACS1Q6VY07 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PACS1Q6VY07 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PACS1Q6VY07 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
PACS1Q6VY07 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.58■□□□□ 0.56
PACS1Q6VY07 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PACS1Q6VY07 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PACS1Q6VY07 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PACS1Q6VY07 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PACS1Q6VY07 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PACS1Q6VY07 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PACS1Q6VY07 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.57■□□□□ 0.56
PACS1Q6VY07 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PACS1Q6VY07 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PACS1Q6VY07 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PACS1Q6VY07 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PACS1Q6VY07 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PACS1Q6VY07 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.57■□□□□ 0.56
PACS1Q6VY07 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PACS1Q6VY07 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
PACS1Q6VY07 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PACS1Q6VY07 AL023284.2-201ENST00000405850 579 ntBASIC18.57■□□□□ 0.56
PACS1Q6VY07 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.57■□□□□ 0.56
PACS1Q6VY07 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PACS1Q6VY07 NAPSB-206ENST00000562112 1266 ntBASIC18.57■□□□□ 0.56
PACS1Q6VY07 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PACS1Q6VY07 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.57■□□□□ 0.56
PACS1Q6VY07 CYP2D8P-201ENST00000433633 1490 ntBASIC18.57■□□□□ 0.56
PACS1Q6VY07 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PACS1Q6VY07 GPAT2P1-201ENST00000444924 1672 ntBASIC18.57■□□□□ 0.56
PACS1Q6VY07 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PACS1Q6VY07 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
PACS1Q6VY07 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
PACS1Q6VY07 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PACS1Q6VY07 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PACS1Q6VY07 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PACS1Q6VY07 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PACS1Q6VY07 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PACS1Q6VY07 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PACS1Q6VY07 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PACS1Q6VY07 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PACS1Q6VY07 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PACS1Q6VY07 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.56■□□□□ 0.56
PACS1Q6VY07 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.56■□□□□ 0.56
PACS1Q6VY07 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.56■□□□□ 0.56
PACS1Q6VY07 MCCD1P1-208ENST00000445732 328 ntBASIC18.56■□□□□ 0.56
PACS1Q6VY07 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
PACS1Q6VY07 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.56■□□□□ 0.56
PACS1Q6VY07 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PACS1Q6VY07 AC010653.2-201ENST00000623505 997 ntBASIC18.56■□□□□ 0.56
PACS1Q6VY07 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.56■□□□□ 0.56
PACS1Q6VY07 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PACS1Q6VY07 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PACS1Q6VY07 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.56■□□□□ 0.56
PACS1Q6VY07 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PACS1Q6VY07 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PACS1Q6VY07 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.56■□□□□ 0.56
PACS1Q6VY07 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PACS1Q6VY07 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PACS1Q6VY07 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PACS1Q6VY07 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PACS1Q6VY07 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PACS1Q6VY07 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PACS1Q6VY07 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
PACS1Q6VY07 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.55■□□□□ 0.56
PACS1Q6VY07 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.55■□□□□ 0.56
PACS1Q6VY07 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PACS1Q6VY07 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PACS1Q6VY07 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms