Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXR1Q6PIV2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.18■□□□□ 0.66
FOXR1Q6PIV2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXR1Q6PIV2 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.18■□□□□ 0.66
FOXR1Q6PIV2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXR1Q6PIV2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXR1Q6PIV2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 AC012306.2-201ENST00000609350 630 ntBASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXR1Q6PIV2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.16■□□□□ 0.66
FOXR1Q6PIV2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.16■□□□□ 0.66
FOXR1Q6PIV2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
FOXR1Q6PIV2 AL118508.1-201ENST00000613502 2345 ntBASIC19.16■□□□□ 0.66
FOXR1Q6PIV2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXR1Q6PIV2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
FOXR1Q6PIV2 AL353807.1-201ENST00000427475 662 ntBASIC19.16■□□□□ 0.66
FOXR1Q6PIV2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.16■□□□□ 0.66
FOXR1Q6PIV2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.16■□□□□ 0.66
FOXR1Q6PIV2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
FOXR1Q6PIV2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.16■□□□□ 0.66
FOXR1Q6PIV2 MIR6786-201ENST00000616843 113 ntBASIC19.16■□□□□ 0.66
FOXR1Q6PIV2 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXR1Q6PIV2 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXR1Q6PIV2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.16■□□□□ 0.66
FOXR1Q6PIV2 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.16■□□□□ 0.66
FOXR1Q6PIV2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.16■□□□□ 0.66
FOXR1Q6PIV2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FOXR1Q6PIV2 PP12613-201ENST00000424958 2230 ntBASIC19.16■□□□□ 0.66
FOXR1Q6PIV2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.16■□□□□ 0.66
FOXR1Q6PIV2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.16■□□□□ 0.66
FOXR1Q6PIV2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FOXR1Q6PIV2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXR1Q6PIV2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
FOXR1Q6PIV2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 AP002982.1-201ENST00000492365 877 ntBASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 AC004264.1-201ENST00000608354 794 ntBASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXR1Q6PIV2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms