Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.12■□□□□ 0.81
CDKAL1Q5VV42 AL049637.2-201ENST00000641778 930 ntBASIC20.12■□□□□ 0.81
CDKAL1Q5VV42 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDKAL1Q5VV42 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.12■□□□□ 0.81
CDKAL1Q5VV42 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDKAL1Q5VV42 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDKAL1Q5VV42 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDKAL1Q5VV42 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CDKAL1Q5VV42 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CDKAL1Q5VV42 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDKAL1Q5VV42 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDKAL1Q5VV42 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDKAL1Q5VV42 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.12■□□□□ 0.81
CDKAL1Q5VV42 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.12■□□□□ 0.81
CDKAL1Q5VV42 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.12■□□□□ 0.81
CDKAL1Q5VV42 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDKAL1Q5VV42 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDKAL1Q5VV42 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDKAL1Q5VV42 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.11■□□□□ 0.81
CDKAL1Q5VV42 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.11■□□□□ 0.81
CDKAL1Q5VV42 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.11■□□□□ 0.81
CDKAL1Q5VV42 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.11■□□□□ 0.81
CDKAL1Q5VV42 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDKAL1Q5VV42 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDKAL1Q5VV42 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDKAL1Q5VV42 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDKAL1Q5VV42 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.11■□□□□ 0.81
CDKAL1Q5VV42 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.11■□□□□ 0.81
CDKAL1Q5VV42 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDKAL1Q5VV42 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDKAL1Q5VV42 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDKAL1Q5VV42 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CDKAL1Q5VV42 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDKAL1Q5VV42 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
CDKAL1Q5VV42 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDKAL1Q5VV42 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDKAL1Q5VV42 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.11■□□□□ 0.81
CDKAL1Q5VV42 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDKAL1Q5VV42 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDKAL1Q5VV42 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CDKAL1Q5VV42 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CDKAL1Q5VV42 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDKAL1Q5VV42 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CDKAL1Q5VV42 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CDKAL1Q5VV42 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 KRT8P7-201ENST00000533003 1432 ntBASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 KRT18P23-201ENST00000435622 1283 ntBASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 GCSHP5-201ENST00000443090 522 ntBASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 AP003041.3-201ENST00000527151 707 ntBASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 AC142381.4-202ENST00000563973 229 ntBASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 WWOX-216ENST00000569818 525 ntBASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 CR769767.2-201ENST00000622735 460 ntBASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 KRT18P55-202ENST00000578578 1546 ntBASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDKAL1Q5VV42 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDKAL1Q5VV42 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDKAL1Q5VV42 AL645608.8-201ENST00000606034 2086 ntBASIC20.09■□□□□ 0.81
CDKAL1Q5VV42 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CDKAL1Q5VV42 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.09■□□□□ 0.81
CDKAL1Q5VV42 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDKAL1Q5VV42 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDKAL1Q5VV42 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDKAL1Q5VV42 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDKAL1Q5VV42 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDKAL1Q5VV42 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDKAL1Q5VV42 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.09■□□□□ 0.81
CDKAL1Q5VV42 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDKAL1Q5VV42 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.09■□□□□ 0.81
CDKAL1Q5VV42 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDKAL1Q5VV42 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.09■□□□□ 0.81
CDKAL1Q5VV42 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.09■□□□□ 0.81
CDKAL1Q5VV42 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDKAL1Q5VV42 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDKAL1Q5VV42 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDKAL1Q5VV42 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDKAL1Q5VV42 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
CDKAL1Q5VV42 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDKAL1Q5VV42 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CDKAL1Q5VV42 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDKAL1Q5VV42 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms