Protein–RNA interactions for Protein: Q5T700

LDLRAD1, Low-density lipoprotein receptor class A domain-containing protein 1, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD1Q5T700 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LDLRAD1Q5T700 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LDLRAD1Q5T700 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LDLRAD1Q5T700 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LDLRAD1Q5T700 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LDLRAD1Q5T700 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LDLRAD1Q5T700 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LDLRAD1Q5T700 AC023274.1-201ENST00000418278 595 ntBASIC21.19■□□□□ 0.98
LDLRAD1Q5T700 LAGE3P1-201ENST00000425356 484 ntBASIC21.19■□□□□ 0.98
LDLRAD1Q5T700 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LDLRAD1Q5T700 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC21.19■□□□□ 0.98
LDLRAD1Q5T700 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC21.19■□□□□ 0.98
LDLRAD1Q5T700 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.19■□□□□ 0.98
LDLRAD1Q5T700 RPS29-206ENST00000557111 488 ntTSL 2 BASIC21.19■□□□□ 0.98
LDLRAD1Q5T700 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC21.19■□□□□ 0.98
LDLRAD1Q5T700 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC21.19■□□□□ 0.98
LDLRAD1Q5T700 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC21.19■□□□□ 0.98
LDLRAD1Q5T700 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC21.19■□□□□ 0.98
LDLRAD1Q5T700 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LDLRAD1Q5T700 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LDLRAD1Q5T700 AL157384.1-201ENST00000445995 2473 ntBASIC21.19■□□□□ 0.98
LDLRAD1Q5T700 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LDLRAD1Q5T700 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LDLRAD1Q5T700 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.19■□□□□ 0.98
LDLRAD1Q5T700 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
LDLRAD1Q5T700 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LDLRAD1Q5T700 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC21.19■□□□□ 0.98
LDLRAD1Q5T700 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC21.19■□□□□ 0.98
LDLRAD1Q5T700 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
LDLRAD1Q5T700 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.18■□□□□ 0.98
LDLRAD1Q5T700 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LDLRAD1Q5T700 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
LDLRAD1Q5T700 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
LDLRAD1Q5T700 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LDLRAD1Q5T700 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21.18■□□□□ 0.98
LDLRAD1Q5T700 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.18■□□□□ 0.98
LDLRAD1Q5T700 CYGB-205ENST00000590175 830 ntTSL 3 BASIC21.18■□□□□ 0.98
LDLRAD1Q5T700 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC21.18■□□□□ 0.98
LDLRAD1Q5T700 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
LDLRAD1Q5T700 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LDLRAD1Q5T700 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LDLRAD1Q5T700 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.18■□□□□ 0.98
LDLRAD1Q5T700 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LDLRAD1Q5T700 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LDLRAD1Q5T700 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LDLRAD1Q5T700 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
LDLRAD1Q5T700 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LDLRAD1Q5T700 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.17■□□□□ 0.98
LDLRAD1Q5T700 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.17■□□□□ 0.98
LDLRAD1Q5T700 LINC00602-201ENST00000629776 2065 ntBASIC21.17■□□□□ 0.98
LDLRAD1Q5T700 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LDLRAD1Q5T700 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LDLRAD1Q5T700 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LDLRAD1Q5T700 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC21.17■□□□□ 0.98
LDLRAD1Q5T700 SRP19-202ENST00000445150 833 ntTSL 2 BASIC21.17■□□□□ 0.98
LDLRAD1Q5T700 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LDLRAD1Q5T700 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC21.17■□□□□ 0.98
LDLRAD1Q5T700 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LDLRAD1Q5T700 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC21.17■□□□□ 0.98
LDLRAD1Q5T700 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LDLRAD1Q5T700 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LDLRAD1Q5T700 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
LDLRAD1Q5T700 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LDLRAD1Q5T700 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
LDLRAD1Q5T700 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LDLRAD1Q5T700 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
LDLRAD1Q5T700 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LDLRAD1Q5T700 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.16■□□□□ 0.98
LDLRAD1Q5T700 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
LDLRAD1Q5T700 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LDLRAD1Q5T700 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LDLRAD1Q5T700 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LDLRAD1Q5T700 KRT18P28-201ENST00000453838 1332 ntBASIC21.16■□□□□ 0.98
LDLRAD1Q5T700 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC21.16■□□□□ 0.98
LDLRAD1Q5T700 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LDLRAD1Q5T700 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LDLRAD1Q5T700 BEX3-201ENST00000361298 921 ntTSL 2 BASIC21.16■□□□□ 0.98
LDLRAD1Q5T700 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.16■□□□□ 0.98
LDLRAD1Q5T700 AC211486.1-202ENST00000416371 468 ntBASIC21.16■□□□□ 0.98
LDLRAD1Q5T700 KRT18P65-201ENST00000439811 1286 ntBASIC21.16■□□□□ 0.98
LDLRAD1Q5T700 AC211476.1-201ENST00000503899 468 ntBASIC21.16■□□□□ 0.98
LDLRAD1Q5T700 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC21.16■□□□□ 0.98
LDLRAD1Q5T700 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC21.16■□□□□ 0.98
LDLRAD1Q5T700 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC21.16■□□□□ 0.98
LDLRAD1Q5T700 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
LDLRAD1Q5T700 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.16■□□□□ 0.98
LDLRAD1Q5T700 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
LDLRAD1Q5T700 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LDLRAD1Q5T700 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
LDLRAD1Q5T700 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.15■□□□□ 0.98
LDLRAD1Q5T700 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LDLRAD1Q5T700 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LDLRAD1Q5T700 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.15■□□□□ 0.98
LDLRAD1Q5T700 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC21.15■□□□□ 0.98
LDLRAD1Q5T700 MSRA-206ENST00000521209 814 ntTSL 3 BASIC21.15■□□□□ 0.98
LDLRAD1Q5T700 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC21.15■□□□□ 0.98
LDLRAD1Q5T700 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LDLRAD1Q5T700 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LDLRAD1Q5T700 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LDLRAD1Q5T700 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms