Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 AC073508.3-201ENST00000619697 1419 ntBASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.91■□□□□ 0.14
RSPO1Q2MKA7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 AC067852.2-201ENST00000590513 2313 ntBASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 GCSHP2-201ENST00000560971 527 ntBASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RSPO1Q2MKA7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 AC211429.1-201ENST00000415277 523 ntBASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 AC009065.1-201ENST00000564055 1225 ntBASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RSPO1Q2MKA7 AL157888.1-201ENST00000631930 593 ntBASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms