Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.18■□□□□ 0.18
UBE2NP61088 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.18■□□□□ 0.18
UBE2NP61088 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.18■□□□□ 0.18
UBE2NP61088 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.18■□□□□ 0.18
UBE2NP61088 MIR3917-201ENST00000580971 93 ntBASIC16.18■□□□□ 0.18
UBE2NP61088 MIR3180-4-201ENST00000582223 153 ntBASIC16.18■□□□□ 0.18
UBE2NP61088 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.18■□□□□ 0.18
UBE2NP61088 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2NP61088 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
UBE2NP61088 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2NP61088 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2NP61088 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2NP61088 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
UBE2NP61088 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.18■□□□□ 0.18
UBE2NP61088 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2NP61088 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
UBE2NP61088 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
UBE2NP61088 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2NP61088 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
UBE2NP61088 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
UBE2NP61088 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2NP61088 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2NP61088 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2NP61088 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2NP61088 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2NP61088 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2NP61088 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
UBE2NP61088 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
UBE2NP61088 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
UBE2NP61088 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
UBE2NP61088 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2NP61088 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.17■□□□□ 0.18
UBE2NP61088 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
UBE2NP61088 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2NP61088 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2NP61088 ARMC10P1-201ENST00000313754 855 ntBASIC16.17■□□□□ 0.18
UBE2NP61088 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.17■□□□□ 0.18
UBE2NP61088 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.17■□□□□ 0.18
UBE2NP61088 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.17■□□□□ 0.18
UBE2NP61088 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2NP61088 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.17■□□□□ 0.18
UBE2NP61088 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
UBE2NP61088 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2NP61088 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2NP61088 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
UBE2NP61088 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.17■□□□□ 0.18
UBE2NP61088 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
UBE2NP61088 KRT8P50-201ENST00000562022 1438 ntBASIC16.17■□□□□ 0.18
UBE2NP61088 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.17■□□□□ 0.18
UBE2NP61088 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2NP61088 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.17■□□□□ 0.18
UBE2NP61088 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2NP61088 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.17■□□□□ 0.18
UBE2NP61088 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
UBE2NP61088 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.16■□□□□ 0.18
UBE2NP61088 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.16■□□□□ 0.18
UBE2NP61088 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2NP61088 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
UBE2NP61088 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2NP61088 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2NP61088 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
UBE2NP61088 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
UBE2NP61088 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.16■□□□□ 0.18
UBE2NP61088 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.16■□□□□ 0.18
UBE2NP61088 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
UBE2NP61088 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.16■□□□□ 0.18
UBE2NP61088 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
UBE2NP61088 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.16■□□□□ 0.18
UBE2NP61088 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2NP61088 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2NP61088 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2NP61088 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2NP61088 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2NP61088 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2NP61088 MYLKP1-201ENST00000509077 1580 ntBASIC16.16■□□□□ 0.18
UBE2NP61088 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2NP61088 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
UBE2NP61088 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.16■□□□□ 0.18
UBE2NP61088 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
UBE2NP61088 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBE2NP61088 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.16■□□□□ 0.18
UBE2NP61088 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.16■□□□□ 0.18
UBE2NP61088 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.16■□□□□ 0.18
UBE2NP61088 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2NP61088 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.15■□□□□ 0.18
UBE2NP61088 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2NP61088 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2NP61088 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2NP61088 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2NP61088 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2NP61088 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.15■□□□□ 0.18
UBE2NP61088 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.15■□□□□ 0.18
UBE2NP61088 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2NP61088 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
UBE2NP61088 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2NP61088 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2NP61088 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2NP61088 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.15■□□□□ 0.18
UBE2NP61088 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2NP61088 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms