Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.61■□□□□ 0.25
CLUP10909 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLUP10909 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLUP10909 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLUP10909 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.61■□□□□ 0.25
CLUP10909 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.61■□□□□ 0.25
CLUP10909 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLUP10909 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLUP10909 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLUP10909 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLUP10909 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CLUP10909 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLUP10909 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLUP10909 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLUP10909 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLUP10909 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLUP10909 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLUP10909 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLUP10909 AC011506.1-201ENST00000474329 610 ntBASIC16.61■□□□□ 0.25
CLUP10909 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.61■□□□□ 0.25
CLUP10909 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CLUP10909 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.61■□□□□ 0.25
CLUP10909 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLUP10909 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.61■□□□□ 0.25
CLUP10909 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLUP10909 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.61■□□□□ 0.25
CLUP10909 REXO1L9P-201ENST00000604264 2108 ntBASIC16.61■□□□□ 0.25
CLUP10909 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLUP10909 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLUP10909 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLUP10909 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLUP10909 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLUP10909 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLUP10909 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CLUP10909 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.61■□□□□ 0.25
CLUP10909 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLUP10909 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLUP10909 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.61■□□□□ 0.25
CLUP10909 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLUP10909 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLUP10909 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLUP10909 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLUP10909 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLUP10909 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLUP10909 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLUP10909 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLUP10909 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLUP10909 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLUP10909 MYLKP1-201ENST00000509077 1580 ntBASIC16.6■□□□□ 0.25
CLUP10909 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLUP10909 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLUP10909 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLUP10909 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLUP10909 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
CLUP10909 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CLUP10909 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.6■□□□□ 0.25
CLUP10909 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
CLUP10909 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.6■□□□□ 0.25
CLUP10909 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.6■□□□□ 0.25
CLUP10909 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.6■□□□□ 0.25
CLUP10909 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.6■□□□□ 0.25
CLUP10909 MIR4651-201ENST00000582622 73 ntBASIC16.6■□□□□ 0.25
CLUP10909 AL031985.4-201ENST00000642138 673 ntBASIC16.6■□□□□ 0.25
CLUP10909 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLUP10909 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.6■□□□□ 0.25
CLUP10909 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLUP10909 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLUP10909 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLUP10909 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CLUP10909 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLUP10909 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLUP10909 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLUP10909 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLUP10909 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLUP10909 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLUP10909 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLUP10909 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.59■□□□□ 0.25
CLUP10909 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.59■□□□□ 0.25
CLUP10909 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.59■□□□□ 0.25
CLUP10909 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.59■□□□□ 0.25
CLUP10909 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.59■□□□□ 0.25
CLUP10909 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CLUP10909 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.59■□□□□ 0.25
CLUP10909 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.59■□□□□ 0.25
CLUP10909 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLUP10909 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLUP10909 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.59■□□□□ 0.25
CLUP10909 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CLUP10909 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLUP10909 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLUP10909 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLUP10909 FAM207BP-201ENST00000447172 505 ntBASIC16.59■□□□□ 0.25
CLUP10909 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.59■□□□□ 0.25
CLUP10909 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLUP10909 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.59■□□□□ 0.25
CLUP10909 AF186192.3-201ENST00000583427 947 ntBASIC16.59■□□□□ 0.25
CLUP10909 AC130371.2-201ENST00000619443 611 ntBASIC16.59■□□□□ 0.25
CLUP10909 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLUP10909 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLUP10909 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms