Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PDE6DO43924 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PDE6DO43924 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDE6DO43924 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.27□□□□□ -0.13
PDE6DO43924 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.27□□□□□ -0.13
PDE6DO43924 AL139384.1-201ENST00000612143 3047 ntBASIC14.27□□□□□ -0.13
PDE6DO43924 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDE6DO43924 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PDE6DO43924 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDE6DO43924 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDE6DO43924 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDE6DO43924 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.27□□□□□ -0.13
PDE6DO43924 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
PDE6DO43924 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PDE6DO43924 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDE6DO43924 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDE6DO43924 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDE6DO43924 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDE6DO43924 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PDE6DO43924 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDE6DO43924 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.26□□□□□ -0.13
PDE6DO43924 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
PDE6DO43924 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PDE6DO43924 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDE6DO43924 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDE6DO43924 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDE6DO43924 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDE6DO43924 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDE6DO43924 RER1-204ENST00000378518 522 ntTSL 3 BASIC14.26□□□□□ -0.13
PDE6DO43924 KRT18P11-201ENST00000435214 1283 ntBASIC14.26□□□□□ -0.13
PDE6DO43924 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDE6DO43924 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDE6DO43924 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PDE6DO43924 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PDE6DO43924 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PDE6DO43924 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDE6DO43924 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.26□□□□□ -0.13
PDE6DO43924 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PDE6DO43924 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDE6DO43924 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PDE6DO43924 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDE6DO43924 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDE6DO43924 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDE6DO43924 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PDE6DO43924 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PDE6DO43924 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDE6DO43924 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDE6DO43924 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDE6DO43924 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
PDE6DO43924 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDE6DO43924 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDE6DO43924 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDE6DO43924 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.25□□□□□ -0.13
PDE6DO43924 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PDE6DO43924 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.25□□□□□ -0.13
PDE6DO43924 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
PDE6DO43924 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
PDE6DO43924 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDE6DO43924 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDE6DO43924 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDE6DO43924 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.25□□□□□ -0.13
PDE6DO43924 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.25□□□□□ -0.13
PDE6DO43924 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PDE6DO43924 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDE6DO43924 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PDE6DO43924 STOX2-205ENST00000513034 807 ntTSL 3 BASIC14.25□□□□□ -0.13
PDE6DO43924 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PDE6DO43924 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PDE6DO43924 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.25□□□□□ -0.13
PDE6DO43924 AC110285.6-201ENST00000617652 491 ntBASIC14.25□□□□□ -0.13
PDE6DO43924 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDE6DO43924 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDE6DO43924 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PDE6DO43924 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDE6DO43924 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
PDE6DO43924 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.25□□□□□ -0.13
PDE6DO43924 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PDE6DO43924 AL096828.2-201ENST00000567259 1965 ntBASIC14.25□□□□□ -0.13
PDE6DO43924 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PDE6DO43924 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDE6DO43924 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDE6DO43924 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDE6DO43924 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDE6DO43924 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDE6DO43924 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDE6DO43924 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.24□□□□□ -0.13
PDE6DO43924 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDE6DO43924 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDE6DO43924 AC018695.7-201ENST00000624587 2492 ntBASIC14.24□□□□□ -0.13
PDE6DO43924 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDE6DO43924 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC14.24□□□□□ -0.13
PDE6DO43924 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDE6DO43924 AC008406.3-201ENST00000620001 1374 ntBASIC14.24□□□□□ -0.13
PDE6DO43924 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PDE6DO43924 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.24□□□□□ -0.13
PDE6DO43924 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDE6DO43924 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PDE6DO43924 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
PDE6DO43924 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDE6DO43924 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms