Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC188H7C350 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC188H7C350 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC188H7C350 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC188H7C350 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC188H7C350 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC188H7C350 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC188H7C350 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.14■□□□□ 0.65
CCDC188H7C350 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC188H7C350 AL353708.3-201ENST00000610272 989 ntBASIC19.14■□□□□ 0.65
CCDC188H7C350 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC188H7C350 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCDC188H7C350 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
CCDC188H7C350 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC188H7C350 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC188H7C350 OR6D1P-202ENST00000641007 5290 ntBASIC19.14■□□□□ 0.65
CCDC188H7C350 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC188H7C350 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC188H7C350 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC188H7C350 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC188H7C350 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC188H7C350 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
CCDC188H7C350 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC188H7C350 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC188H7C350 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC188H7C350 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC188H7C350 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC188H7C350 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC188H7C350 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC188H7C350 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CCDC188H7C350 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CCDC188H7C350 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC188H7C350 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CCDC188H7C350 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC188H7C350 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC188H7C350 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC188H7C350 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC188H7C350 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC188H7C350 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.13■□□□□ 0.65
CCDC188H7C350 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC188H7C350 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC188H7C350 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC188H7C350 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC188H7C350 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CCDC188H7C350 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC188H7C350 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC188H7C350 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC188H7C350 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CCDC188H7C350 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC188H7C350 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC188H7C350 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC188H7C350 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC188H7C350 AC009053.2-201ENST00000563701 2365 ntBASIC19.12■□□□□ 0.65
CCDC188H7C350 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC188H7C350 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC188H7C350 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC188H7C350 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC188H7C350 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC188H7C350 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC188H7C350 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC188H7C350 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC188H7C350 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC188H7C350 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC188H7C350 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC188H7C350 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC188H7C350 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CCDC188H7C350 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC188H7C350 KSR1P1-201ENST00000446298 240 ntBASIC19.12■□□□□ 0.65
CCDC188H7C350 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.12■□□□□ 0.65
CCDC188H7C350 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
CCDC188H7C350 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CCDC188H7C350 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.12■□□□□ 0.65
CCDC188H7C350 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC188H7C350 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC188H7C350 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC188H7C350 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC188H7C350 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CCDC188H7C350 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CCDC188H7C350 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CCDC188H7C350 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC188H7C350 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC188H7C350 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CCDC188H7C350 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC188H7C350 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC188H7C350 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC188H7C350 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC188H7C350 AC034236.2-201ENST00000606662 1610 ntBASIC19.11■□□□□ 0.65
CCDC188H7C350 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC188H7C350 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC188H7C350 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC188H7C350 KRT8P50-201ENST00000562022 1438 ntBASIC19.11■□□□□ 0.65
CCDC188H7C350 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC188H7C350 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC188H7C350 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC188H7C350 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC188H7C350 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC188H7C350 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC188H7C350 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC188H7C350 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC188H7C350 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms