Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 GMCL1P1-201ENST00000463439 1581 ntBASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TRIM49BA6NDI0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM49BA6NDI0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM49BA6NDI0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM49BA6NDI0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM49BA6NDI0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM49BA6NDI0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM49BA6NDI0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
TRIM49BA6NDI0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM49BA6NDI0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM49BA6NDI0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM49BA6NDI0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM49BA6NDI0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM49BA6NDI0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TRIM49BA6NDI0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM49BA6NDI0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.27■□□□□ 0.84
TRIM49BA6NDI0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM49BA6NDI0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.27■□□□□ 0.84
TRIM49BA6NDI0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
TRIM49BA6NDI0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.27■□□□□ 0.84
TRIM49BA6NDI0 AP006294.2-201ENST00000641667 209 ntBASIC20.27■□□□□ 0.84
TRIM49BA6NDI0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM49BA6NDI0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM49BA6NDI0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM49BA6NDI0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM49BA6NDI0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM49BA6NDI0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM49BA6NDI0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM49BA6NDI0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TRIM49BA6NDI0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.27■□□□□ 0.83
TRIM49BA6NDI0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM49BA6NDI0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.27■□□□□ 0.83
TRIM49BA6NDI0 HOXB1-202ENST00000577092 1414 ntBASIC20.27■□□□□ 0.83
TRIM49BA6NDI0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 CCR12P-201ENST00000446203 998 ntBASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 WWOX-216ENST00000569818 525 ntBASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 MIR4497-201ENST00000583208 89 ntBASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM49BA6NDI0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM49BA6NDI0 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
TRIM49BA6NDI0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM49BA6NDI0 AC009102.3-201ENST00000623118 1491 ntBASIC20.25■□□□□ 0.83
TRIM49BA6NDI0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM49BA6NDI0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM49BA6NDI0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM49BA6NDI0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM49BA6NDI0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM49BA6NDI0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM49BA6NDI0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM49BA6NDI0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TRIM49BA6NDI0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM49BA6NDI0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.25■□□□□ 0.83
TRIM49BA6NDI0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM49BA6NDI0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM49BA6NDI0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM49BA6NDI0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM49BA6NDI0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM49BA6NDI0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM49BA6NDI0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TRIM49BA6NDI0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM49BA6NDI0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TRIM49BA6NDI0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
TRIM49BA6NDI0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM49BA6NDI0 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms