Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 FEM1AP3-201ENST00000403722 1741 ntBASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 YBX1P4-201ENST00000392794 808 ntBASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 NORAD-201ENST00000565493 5339 ntBASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 PHGDH-210ENST00000641115 1638 ntBASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRBV20-1A0A075B6N2 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 LINC02199-201ENST00000506655 2702 ntBASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 AC008175.2-201ENST00000612840 297 ntBASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 AC099063.4-201ENST00000641099 1602 ntBASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV20-1A0A075B6N2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRBV20-1A0A075B6N2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC12.27□□□□□ -0.44
TRBV20-1A0A075B6N2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRBV20-1A0A075B6N2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TRBV20-1A0A075B6N2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRBV20-1A0A075B6N2 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRBV20-1A0A075B6N2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TRBV20-1A0A075B6N2 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRBV20-1A0A075B6N2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRBV20-1A0A075B6N2 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRBV20-1A0A075B6N2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TRBV20-1A0A075B6N2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRBV20-1A0A075B6N2 AC006116.8-202ENST00000587620 1550 ntBASIC12.27□□□□□ -0.44
TRBV20-1A0A075B6N2 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRBV20-1A0A075B6N2 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRBV20-1A0A075B6N2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRBV20-1A0A075B6N2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRBV20-1A0A075B6N2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRBV20-1A0A075B6N2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms