Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
R3HCC1Q9Y3T6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
R3HCC1Q9Y3T6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.08■□□□□ 0.97
R3HCC1Q9Y3T6 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
R3HCC1Q9Y3T6 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
R3HCC1Q9Y3T6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.08■□□□□ 0.97
R3HCC1Q9Y3T6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.08■□□□□ 0.97
R3HCC1Q9Y3T6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.08■□□□□ 0.97
R3HCC1Q9Y3T6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
R3HCC1Q9Y3T6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
R3HCC1Q9Y3T6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.08■□□□□ 0.97
R3HCC1Q9Y3T6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
R3HCC1Q9Y3T6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.08■□□□□ 0.97
R3HCC1Q9Y3T6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
R3HCC1Q9Y3T6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
R3HCC1Q9Y3T6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.08■□□□□ 0.97
R3HCC1Q9Y3T6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
R3HCC1Q9Y3T6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.08■□□□□ 0.97
R3HCC1Q9Y3T6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.08■□□□□ 0.97
R3HCC1Q9Y3T6 AC066615.1-201ENST00000640911 628 ntBASIC21.08■□□□□ 0.97
R3HCC1Q9Y3T6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
R3HCC1Q9Y3T6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.08■□□□□ 0.96
R3HCC1Q9Y3T6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
R3HCC1Q9Y3T6 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
R3HCC1Q9Y3T6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
R3HCC1Q9Y3T6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
R3HCC1Q9Y3T6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.08■□□□□ 0.96
R3HCC1Q9Y3T6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
R3HCC1Q9Y3T6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
R3HCC1Q9Y3T6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
R3HCC1Q9Y3T6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
R3HCC1Q9Y3T6 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
R3HCC1Q9Y3T6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
R3HCC1Q9Y3T6 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
R3HCC1Q9Y3T6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
R3HCC1Q9Y3T6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
R3HCC1Q9Y3T6 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
R3HCC1Q9Y3T6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.07■□□□□ 0.96
R3HCC1Q9Y3T6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
R3HCC1Q9Y3T6 RPS2P4-201ENST00000476944 856 ntBASIC21.07■□□□□ 0.96
R3HCC1Q9Y3T6 AC093827.2-201ENST00000512654 315 ntBASIC21.07■□□□□ 0.96
R3HCC1Q9Y3T6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.07■□□□□ 0.96
R3HCC1Q9Y3T6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
R3HCC1Q9Y3T6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.07■□□□□ 0.96
R3HCC1Q9Y3T6 TEX21P-204ENST00000641479 1693 ntBASIC21.07■□□□□ 0.96
R3HCC1Q9Y3T6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
R3HCC1Q9Y3T6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
R3HCC1Q9Y3T6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
R3HCC1Q9Y3T6 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
R3HCC1Q9Y3T6 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC21.07■□□□□ 0.96
R3HCC1Q9Y3T6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.07■□□□□ 0.96
R3HCC1Q9Y3T6 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
R3HCC1Q9Y3T6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
R3HCC1Q9Y3T6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
R3HCC1Q9Y3T6 AC141586.3-201ENST00000562166 1838 ntBASIC21.06■□□□□ 0.96
R3HCC1Q9Y3T6 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
R3HCC1Q9Y3T6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
R3HCC1Q9Y3T6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
R3HCC1Q9Y3T6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
R3HCC1Q9Y3T6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
R3HCC1Q9Y3T6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.06■□□□□ 0.96
R3HCC1Q9Y3T6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.06■□□□□ 0.96
R3HCC1Q9Y3T6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.06■□□□□ 0.96
R3HCC1Q9Y3T6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.06■□□□□ 0.96
R3HCC1Q9Y3T6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
R3HCC1Q9Y3T6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC21.06■□□□□ 0.96
R3HCC1Q9Y3T6 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
R3HCC1Q9Y3T6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
R3HCC1Q9Y3T6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
R3HCC1Q9Y3T6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
R3HCC1Q9Y3T6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
R3HCC1Q9Y3T6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.06■□□□□ 0.96
R3HCC1Q9Y3T6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
R3HCC1Q9Y3T6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
R3HCC1Q9Y3T6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
R3HCC1Q9Y3T6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.05■□□□□ 0.96
R3HCC1Q9Y3T6 KRT8P8-201ENST00000434750 1448 ntBASIC21.05■□□□□ 0.96
R3HCC1Q9Y3T6 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
R3HCC1Q9Y3T6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
R3HCC1Q9Y3T6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
R3HCC1Q9Y3T6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
R3HCC1Q9Y3T6 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
R3HCC1Q9Y3T6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
R3HCC1Q9Y3T6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
R3HCC1Q9Y3T6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
R3HCC1Q9Y3T6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.05■□□□□ 0.96
R3HCC1Q9Y3T6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
R3HCC1Q9Y3T6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.05■□□□□ 0.96
R3HCC1Q9Y3T6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.05■□□□□ 0.96
R3HCC1Q9Y3T6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
R3HCC1Q9Y3T6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.05■□□□□ 0.96
R3HCC1Q9Y3T6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.05■□□□□ 0.96
R3HCC1Q9Y3T6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.05■□□□□ 0.96
R3HCC1Q9Y3T6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
R3HCC1Q9Y3T6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
R3HCC1Q9Y3T6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
R3HCC1Q9Y3T6 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
R3HCC1Q9Y3T6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms