Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPH3ALQ9UNE2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPH3ALQ9UNE2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC14.4□□□□□ -0.1
RPH3ALQ9UNE2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.4□□□□□ -0.1
RPH3ALQ9UNE2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPH3ALQ9UNE2 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
RPH3ALQ9UNE2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.4□□□□□ -0.1
RPH3ALQ9UNE2 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RPH3ALQ9UNE2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 AC099398.1-201ENST00000567919 2776 ntBASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 DUSP5P2-201ENST00000426873 1033 ntBASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.38□□□□□ -0.11
RPH3ALQ9UNE2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPH3ALQ9UNE2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.37□□□□□ -0.11
RPH3ALQ9UNE2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPH3ALQ9UNE2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPH3ALQ9UNE2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPH3ALQ9UNE2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RPH3ALQ9UNE2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPH3ALQ9UNE2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPH3ALQ9UNE2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RPH3ALQ9UNE2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.37□□□□□ -0.11
RPH3ALQ9UNE2 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.37□□□□□ -0.11
RPH3ALQ9UNE2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.37□□□□□ -0.11
RPH3ALQ9UNE2 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
RPH3ALQ9UNE2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPH3ALQ9UNE2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms