Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
POLR2J3Q9H1A7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
POLR2J3Q9H1A7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
POLR2J3Q9H1A7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
POLR2J3Q9H1A7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
POLR2J3Q9H1A7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
POLR2J3Q9H1A7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.05■□□□□ 0.32
POLR2J3Q9H1A7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.05■□□□□ 0.32
POLR2J3Q9H1A7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 ESPNP-201ENST00000270691 2015 ntBASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR2J3Q9H1A7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 CA15P1-201ENST00000481698 905 ntBASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 FAM197Y4-202ENST00000622692 608 ntBASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 AC008556.1-201ENST00000610908 2040 ntBASIC17.03■□□□□ 0.32
POLR2J3Q9H1A7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
POLR2J3Q9H1A7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
POLR2J3Q9H1A7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
POLR2J3Q9H1A7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.02■□□□□ 0.32
POLR2J3Q9H1A7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.02■□□□□ 0.32
POLR2J3Q9H1A7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
POLR2J3Q9H1A7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
POLR2J3Q9H1A7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
POLR2J3Q9H1A7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
POLR2J3Q9H1A7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
POLR2J3Q9H1A7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
POLR2J3Q9H1A7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
POLR2J3Q9H1A7 MESTP1-201ENST00000404287 994 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms