Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TTC9Q92623 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
TTC9Q92623 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TTC9Q92623 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TTC9Q92623 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.51■□□□□ 0.39
TTC9Q92623 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TTC9Q92623 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.51■□□□□ 0.39
TTC9Q92623 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TTC9Q92623 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TTC9Q92623 AC024243.1-201ENST00000609234 778 ntBASIC17.51■□□□□ 0.39
TTC9Q92623 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.51■□□□□ 0.39
TTC9Q92623 AC005332.7-201ENST00000614046 2005 ntBASIC17.51■□□□□ 0.39
TTC9Q92623 AC079602.3-201ENST00000623931 403 ntBASIC17.51■□□□□ 0.39
TTC9Q92623 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TTC9Q92623 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.51■□□□□ 0.39
TTC9Q92623 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TTC9Q92623 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TTC9Q92623 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TTC9Q92623 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TTC9Q92623 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TTC9Q92623 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.51■□□□□ 0.39
TTC9Q92623 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TTC9Q92623 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9Q92623 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9Q92623 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9Q92623 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9Q92623 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9Q92623 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9Q92623 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TTC9Q92623 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TTC9Q92623 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9Q92623 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9Q92623 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TTC9Q92623 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9Q92623 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9Q92623 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9Q92623 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.5■□□□□ 0.39
TTC9Q92623 MIR662-201ENST00000384847 95 ntBASIC17.5■□□□□ 0.39
TTC9Q92623 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.5■□□□□ 0.39
TTC9Q92623 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TTC9Q92623 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
TTC9Q92623 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.5■□□□□ 0.39
TTC9Q92623 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.5■□□□□ 0.39
TTC9Q92623 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9Q92623 AL353801.3-201ENST00000609898 542 ntBASIC17.5■□□□□ 0.39
TTC9Q92623 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9Q92623 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9Q92623 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9Q92623 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TTC9Q92623 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.5■□□□□ 0.39
TTC9Q92623 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9Q92623 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9Q92623 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9Q92623 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9Q92623 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TTC9Q92623 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9Q92623 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9Q92623 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.5■□□□□ 0.39
TTC9Q92623 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9Q92623 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC9Q92623 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TTC9Q92623 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TTC9Q92623 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TTC9Q92623 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TTC9Q92623 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TTC9Q92623 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TTC9Q92623 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TTC9Q92623 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC9Q92623 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.49■□□□□ 0.39
TTC9Q92623 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC9Q92623 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.49■□□□□ 0.39
TTC9Q92623 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC9Q92623 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC9Q92623 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TTC9Q92623 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.49■□□□□ 0.39
TTC9Q92623 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC9Q92623 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.49■□□□□ 0.39
TTC9Q92623 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC9Q92623 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.49■□□□□ 0.39
TTC9Q92623 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC9Q92623 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TTC9Q92623 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.49■□□□□ 0.39
TTC9Q92623 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.49■□□□□ 0.39
TTC9Q92623 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.49■□□□□ 0.39
TTC9Q92623 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
TTC9Q92623 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.49■□□□□ 0.39
TTC9Q92623 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.49■□□□□ 0.39
TTC9Q92623 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.49■□□□□ 0.39
TTC9Q92623 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC9Q92623 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TTC9Q92623 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
TTC9Q92623 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TTC9Q92623 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TTC9Q92623 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.48■□□□□ 0.39
TTC9Q92623 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
TTC9Q92623 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC9Q92623 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC9Q92623 FEM1AP3-201ENST00000403722 1741 ntBASIC17.48■□□□□ 0.39
TTC9Q92623 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC9Q92623 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms