Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 CLCC1-209ENST00000482889 752 ntTSL 36.22□□□□□ -1.417e-8■□□□□ 10.7
SND1Q7KZF4 CLCC1-208ENST00000473062 319 ntTSL 36.05□□□□□ -1.447e-8■□□□□ 10.7
SND1Q7KZF4 SEMA3B-215ENST00000621029 934 ntTSL 529.96■■■□□ 2.394e-9■□□□□ 10.7
SND1Q7KZF4 PAQR7-201ENST00000374296 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.454e-9■□□□□ 10.7
SND1Q7KZF4 GLB1-217ENST00000490658 257 ntTSL 38.46□□□□□ -1.064e-9■□□□□ 10.7
SND1Q7KZF4 FRAS1-205ENST00000509802 564 ntTSL 57.69□□□□□ -1.184e-9■□□□□ 10.7
SND1Q7KZF4 ACSL3-208ENST00000495541 749 ntTSL 26.95□□□□□ -1.33e-6■□□□□ 10.7
SND1Q7KZF4 HADHA-204ENST00000492433 752 ntTSL 210.55□□□□□ -0.723e-10■□□□□ 10.7
SND1Q7KZF4 ABCC10-206ENST00000443426 774 ntTSL 222.08■■□□□ 1.139e-9■□□□□ 10.6
SND1Q7KZF4 ABCC10-203ENST00000372515 933 ntTSL 517.84■□□□□ 0.459e-9■□□□□ 10.6
SND1Q7KZF4 GPS1-205ENST00000578168 583 ntTSL 216.47■□□□□ 0.239e-9■□□□□ 10.6
SND1Q7KZF4 GPS1-218ENST00000583486 796 ntTSL 215.31■□□□□ 0.049e-9■□□□□ 10.6
SND1Q7KZF4 LDHA-209ENST00000478970 732 ntTSL 216.38■□□□□ 0.212e-28■□□□□ 10.6
SND1Q7KZF4 LDHA-212ENST00000495052 682 ntTSL 511.52□□□□□ -0.572e-28■□□□□ 10.6
SND1Q7KZF4 LDHA-217ENST00000539814 556 ntTSL 410.32□□□□□ -0.762e-28■□□□□ 10.6
SND1Q7KZF4 LDHA-224ENST00000545467 570 ntTSL 28.48□□□□□ -1.052e-28■□□□□ 10.6
SND1Q7KZF4 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.99□□□□□ -1.612e-28■□□□□ 10.6
SND1Q7KZF4 FBLN1-217ENST00000476366 872 ntTSL 513.27□□□□□ -0.292e-8■□□□□ 10.6
SND1Q7KZF4 SLC38A1-205ENST00000548979 543 ntTSL 49.73□□□□□ -0.853e-7■□□□□ 10.6
SND1Q7KZF4 ECM1-207ENST00000498579 943 ntTSL 319.42■□□□□ 0.74e-8■□□□□ 10.6
SND1Q7KZF4 MCM3-202ENST00000419835 2523 ntTSL 2 BASIC13.64□□□□□ -0.236e-7■□□□□ 10.6
SND1Q7KZF4 MCM3-201ENST00000229854 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.556e-7■□□□□ 10.6
SND1Q7KZF4 MCM3-207ENST00000616552 3208 ntTSL 1 (best) BASIC10.68□□□□□ -0.76e-7■□□□□ 10.6
SND1Q7KZF4 MCM3-205ENST00000596288 3169 ntTSL 1 (best) BASIC9.86□□□□□ -0.836e-7■□□□□ 10.6
SND1Q7KZF4 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.482e-10■□□□□ 10.6
SND1Q7KZF4 LDHB-205ENST00000470280 710 ntTSL 210.82□□□□□ -0.682e-21■□□□□ 10.6
SND1Q7KZF4 LDHB-204ENST00000450584 732 ntTSL 310.18□□□□□ -0.782e-21■□□□□ 10.6
SND1Q7KZF4 ANAPC2-207ENST00000495611 747 ntTSL 219.4■□□□□ 0.75e-6■□□□□ 10.6
SND1Q7KZF4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.65e-6■□□□□ 10.6
SND1Q7KZF4 SPTLC1-206ENST00000482632 837 ntTSL 510.39□□□□□ -0.754e-6■□□□□ 10.6
SND1Q7KZF4 SLC20A1-207ENST00000490674 3202 ntTSL 1 (best)6.07□□□□□ -1.442e-8■□□□□ 10.6
SND1Q7KZF4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.78e-7■□□□□ 10.6
SND1Q7KZF4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.648e-7■□□□□ 10.6
SND1Q7KZF4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.648e-7■□□□□ 10.6
SND1Q7KZF4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.538e-7■□□□□ 10.6
SND1Q7KZF4 CCT3-215ENST00000496684 748 ntTSL 27.98□□□□□ -1.138e-7■□□□□ 10.6
SND1Q7KZF4 CCT3-216ENST00000533194 581 ntTSL 37.49□□□□□ -1.218e-7■□□□□ 10.6
SND1Q7KZF4 CCT3-207ENST00000413555 842 ntTSL 56.59□□□□□ -1.358e-7■□□□□ 10.6
SND1Q7KZF4 AKAP6-202ENST00000553547 2274 ntTSL 211.53□□□□□ -0.563e-14■□□□□ 10.6
SND1Q7KZF4 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.73□□□□□ -1.173e-14■□□□□ 10.6
SND1Q7KZF4 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.01□□□□□ -1.453e-14■□□□□ 10.6
SND1Q7KZF4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.73e-14■□□□□ 10.6
SND1Q7KZF4 AC016876.2-201ENST00000581621 4554 ntTSL 2 BASIC12.21□□□□□ -0.455e-9■□□□□ 10.6
SND1Q7KZF4 CERS2-209ENST00000482825 1618 ntTSL 514.17□□□□□ -0.141e-8■□□□□ 10.6
SND1Q7KZF4 HSPG2-207ENST00000453796 621 ntTSL 215.01□□□□□ -0.016e-8■□□□□ 10.6
SND1Q7KZF4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.082e-11■□□□□ 10.6
SND1Q7KZF4 ATP5D-208ENST00000592624 1587 nt20.44■□□□□ 0.862e-11■□□□□ 10.6
SND1Q7KZF4 MRFAP1-204ENST00000512914 1982 nt17.91■□□□□ 0.462e-11■□□□□ 10.6
SND1Q7KZF4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.57■□□□□ 0.42e-11■□□□□ 10.6
SND1Q7KZF4 STAR-204ENST00000522050 748 ntTSL 517.26■□□□□ 0.353e-6■□□□□ 10.6
SND1Q7KZF4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.352e-11■□□□□ 10.6
SND1Q7KZF4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.263e-6■□□□□ 10.6
SND1Q7KZF4 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.063e-6■□□□□ 10.6
SND1Q7KZF4 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -02e-11■□□□□ 10.6
SND1Q7KZF4 STAR-202ENST00000520114 3448 ntTSL 211.83□□□□□ -0.523e-6■□□□□ 10.6
SND1Q7KZF4 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.033e-9■□□□□ 10.6
SND1Q7KZF4 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.213e-9■□□□□ 10.6
SND1Q7KZF4 TMEM164-206ENST00000464177 761 ntTSL 513.5□□□□□ -0.253e-9■□□□□ 10.6
SND1Q7KZF4 TMEM164-202ENST00000372068 5566 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.373e-9■□□□□ 10.6
SND1Q7KZF4 TMEM164-201ENST00000288381 5452 ntTSL 5 BASIC12.32□□□□□ -0.443e-9■□□□□ 10.6
SND1Q7KZF4 PIGO-208ENST00000492770 783 ntTSL 318.01■□□□□ 0.477e-7■□□□□ 10.5
SND1Q7KZF4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.79■□□□□ 0.287e-7■□□□□ 10.5
SND1Q7KZF4 VWCE-203ENST00000398808 717 ntTSL 316.21■□□□□ 0.197e-7■□□□□ 10.5
SND1Q7KZF4 SLCO2B1-216ENST00000531756 1720 ntTSL 216.02■□□□□ 0.167e-7■□□□□ 10.5
SND1Q7KZF4 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.137e-7■□□□□ 10.5
SND1Q7KZF4 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.117e-7■□□□□ 10.5
SND1Q7KZF4 NUP210-204ENST00000485755 474 ntTSL 515.66■□□□□ 0.17e-7■□□□□ 10.5
SND1Q7KZF4 SLCO2B1-212ENST00000530015 5875 ntTSL 214.65□□□□□ -0.067e-7■□□□□ 10.5
SND1Q7KZF4 SLCO2B1-204ENST00000454962 3219 ntTSL 2 BASIC12.62□□□□□ -0.397e-7■□□□□ 10.5
SND1Q7KZF4 SLCO2B1-210ENST00000528108 582 ntTSL 312.11□□□□□ -0.477e-7■□□□□ 10.5
SND1Q7KZF4 SLCO2B1-211ENST00000530012 757 ntTSL 411.92□□□□□ -0.57e-7■□□□□ 10.5
SND1Q7KZF4 SLCO2B1-201ENST00000289575 4494 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.667e-7■□□□□ 10.5
SND1Q7KZF4 PIGO-205ENST00000472208 760 ntTSL 59.9□□□□□ -0.827e-7■□□□□ 10.5
SND1Q7KZF4 TSN-205ENST00000478165 578 ntTSL 316.28■□□□□ 0.24e-13■□□□□ 10.5
SND1Q7KZF4 TSN-209ENST00000490717 560 ntTSL 416.28■□□□□ 0.24e-13■□□□□ 10.5
SND1Q7KZF4 TSN-211ENST00000498545 1118 ntTSL 1 (best)16.28■□□□□ 0.24e-13■□□□□ 10.5
SND1Q7KZF4 TSN-203ENST00000455432 555 ntTSL 415.78■□□□□ 0.124e-13■□□□□ 10.5
SND1Q7KZF4 TSN-212ENST00000536142 3328 ntTSL 2 BASIC15.57■□□□□ 0.084e-13■□□□□ 10.5
SND1Q7KZF4 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.064e-13■□□□□ 10.5
SND1Q7KZF4 TSN-208ENST00000490104 2717 ntTSL 214.45□□□□□ -0.14e-13■□□□□ 10.5
SND1Q7KZF4 TSN-204ENST00000467324 2843 ntTSL 513.7□□□□□ -0.224e-13■□□□□ 10.5
SND1Q7KZF4 TSN-202ENST00000409193 1436 ntTSL 5 BASIC12.35□□□□□ -0.434e-13■□□□□ 10.5
SND1Q7KZF4 TSN-210ENST00000495112 605 ntTSL 48.75□□□□□ -1.014e-13■□□□□ 10.5
SND1Q7KZF4 CTNNB1-211ENST00000465552 878 ntTSL 210.27□□□□□ -0.772e-6■□□□□ 10.5
SND1Q7KZF4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.83■□□□□ 0.443e-9■□□□□ 10.5
SND1Q7KZF4 AGRN-208ENST00000479707 584 ntTSL 319.57■□□□□ 0.725e-9■□□□□ 10.5
SND1Q7KZF4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.437e-8■□□□□ 10.5
SND1Q7KZF4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.877e-8■□□□□ 10.5
SND1Q7KZF4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.357e-8■□□□□ 10.5
SND1Q7KZF4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.347e-8■□□□□ 10.5
SND1Q7KZF4 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.047e-8■□□□□ 10.5
SND1Q7KZF4 YWHAZ-207ENST00000395958 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.427e-8■□□□□ 10.5
SND1Q7KZF4 YWHAZ-216ENST00000521309 1399 ntTSL 2 BASIC11.11□□□□□ -0.637e-8■□□□□ 10.5
SND1Q7KZF4 YWHAZ-202ENST00000395948 812 ntTSL 3 BASIC9.88□□□□□ -0.837e-8■□□□□ 10.5
SND1Q7KZF4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.447e-8■□□□□ 10.5
SND1Q7KZF4 YWHAZ-218ENST00000521607 750 ntTSL 35.81□□□□□ -1.487e-8■□□□□ 10.5
SND1Q7KZF4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.557e-8■□□□□ 10.5
SND1Q7KZF4 RPLP2-205ENST00000527517 646 ntTSL 211.98□□□□□ -0.496e-25■□□□□ 10.5
SND1Q7KZF4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.44■□□□□ 0.74e-6■□□□□ 10.5
SND1Q7KZF4 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.33e-6■□□□□ 10.5
Retrieved 100 of 13,567 protein–RNA pairs in 99 ms