RNA–Protein interactions for RNA: ENST00000625635.1

LDHA-225, Transcript of lactate dehydrogenase A, humanhuman

TSL 5 BASIC

Gene LDHA, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-225ENST00000625635 AEBP2Q6ZN18 517 aaPredicted RBP17.37■□□□□ 0.37
LDHA-225ENST00000625635 CHIC1Q5VXU3 224 aa16.82■□□□□ 0.28
LDHA-225ENST00000625635 SENP3Q9H4L4 574 aaPredicted RBP15□□□□□ -0.01
LDHA-225ENST00000625635 PHF23Q9BUL5 403 aaPredicted RBP14.72□□□□□ -0.05
LDHA-225ENST00000625635 FOXD1Q16676 465 aa13.81□□□□□ -0.2
LDHA-225ENST00000625635 PLPPR3Q6T4P5 718 aa13.62□□□□□ -0.23
LDHA-225ENST00000625635 PIAS4Q8N2W9 510 aaPredicted RBP13.05□□□□□ -0.32
LDHA-225ENST00000625635 MSH5O43196 834 aa13.01□□□□□ -0.33
LDHA-225ENST00000625635 ADRA2BP18089 450 aa13.01□□□□□ -0.33
LDHA-225ENST00000625635 PPP6R1Q9UPN7 881 aa12.99□□□□□ -0.33
LDHA-225ENST00000625635 POTEDQ86YR6 584 aa12.21□□□□□ -0.45
LDHA-225ENST00000625635 SCAF1Q9H7N4 1312 aaKnown RBP12.12□□□□□ -0.47
LDHA-225ENST00000625635 PPP4R3CPQ6ZMV5 832 aa11.88□□□□□ -0.51
LDHA-225ENST00000625635 DMRT2Q9Y5R5 561 aa11.87□□□□□ -0.51
LDHA-225ENST00000625635 MAPK8IP2Q13387 824 aaPredicted RBP11.83□□□□□ -0.52
LDHA-225ENST00000625635 CNKSR2Q8WXI2 1034 aa11.68□□□□□ -0.54
LDHA-225ENST00000625635 NCBP3Q53F19 620 aaKnown RBP11.63□□□□□ -0.55
LDHA-225ENST00000625635 RNF216Q9NWF9 866 aaPredicted RBP11.51□□□□□ -0.57
LDHA-225ENST00000625635 HOXD11P31277 338 aaPredicted RBP11.49□□□□□ -0.57
LDHA-225ENST00000625635 DCAF8L1A6NGE4 600 aa11.42□□□□□ -0.58
LDHA-225ENST00000625635 NISCHQ9Y2I1 1504 aa11.35□□□□□ -0.59
LDHA-225ENST00000625635 NPM3O75607 178 aaKnown RBP11.31□□□□□ -0.6
LDHA-225ENST00000625635 KCNA4P22459 653 aa11.25□□□□□ -0.61
LDHA-225ENST00000625635 DNAJC5BQ9UF47 199 aa11.15□□□□□ -0.62
LDHA-225ENST00000625635 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.02□□□□□ -0.65
LDHA-225ENST00000625635 RNF39Q9H2S5 420 aa11.02□□□□□ -0.65
LDHA-225ENST00000625635 CACNB1Q02641 598 aaPredicted RBP10.99□□□□□ -0.65
LDHA-225ENST00000625635 C1QBPQ07021 282 aaKnown RBP10.95□□□□□ -0.66
LDHA-225ENST00000625635 SLC4A1APQ9BWU0 796 aaKnown RBP10.74□□□□□ -0.69
LDHA-225ENST00000625635 U3KPZ7 1027 aaPredicted RBP10.72□□□□□ -0.69
LDHA-225ENST00000625635 APLP2Q06481 763 aa10.7□□□□□ -0.7
LDHA-225ENST00000625635 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.69□□□□□ -0.7
LDHA-225ENST00000625635 SLC4A2P04920 1241 aa10.69□□□□□ -0.7
LDHA-225ENST00000625635 HNRNPUL2Q1KMD3 747 aaKnown RBP10.69□□□□□ -0.7
LDHA-225ENST00000625635 SAMD1Q6SPF0 538 aaPredicted RBP10.59□□□□□ -0.71
LDHA-225ENST00000625635 CAPN15O75808 1086 aa10.56□□□□□ -0.72
LDHA-225ENST00000625635 MYCNP04198 464 aaPredicted RBP10.56□□□□□ -0.72
LDHA-225ENST00000625635 FOXD4L1Q9NU39 408 aa10.53□□□□□ -0.72
LDHA-225ENST00000625635 ZNF219Q9P2Y4 722 aaPredicted RBP10.5□□□□□ -0.73
LDHA-225ENST00000625635 SPINK5Q9NQ38 1064 aaPredicted RBP10.47□□□□□ -0.73
LDHA-225ENST00000625635 TRHP20396 242 aaPredicted RBP10.41□□□□□ -0.74
LDHA-225ENST00000625635 DSG3P32926 999 aa10.37□□□□□ -0.75
LDHA-225ENST00000625635 ZBTB22O15209 634 aa10.27□□□□□ -0.77
LDHA-225ENST00000625635 ABCB7O75027 752 aa10.26□□□□□ -0.77
LDHA-225ENST00000625635 ATXN8OSP0DMR3 200 aa10.23□□□□□ -0.77
LDHA-225ENST00000625635 POLA2Q14181 598 aa10.15□□□□□ -0.78
LDHA-225ENST00000625635 ZBTB12Q9Y330 459 aaPredicted RBP10.15□□□□□ -0.78
LDHA-225ENST00000625635 ATF5Q9Y2D1 282 aaPredicted RBP10.1□□□□□ -0.79
LDHA-225ENST00000625635 EHMT2Q96KQ7 1210 aa10.08□□□□□ -0.8
LDHA-225ENST00000625635 RBM42Q9BTD8 480 aaKnown RBP10.06□□□□□ -0.8
LDHA-225ENST00000625635 CCDC180Q9P1Z9 1646 aa10.04□□□□□ -0.8
LDHA-225ENST00000625635 CSRNP3Q8WYN3 585 aa10.02□□□□□ -0.81
LDHA-225ENST00000625635 FBLN2P98095 1184 aa9.94□□□□□ -0.82
LDHA-225ENST00000625635 OSCARQ8IYS5 282 aa9.84□□□□□ -0.83
LDHA-225ENST00000625635 AKT1S1Q96B36 256 aa9.8□□□□□ -0.84
LDHA-225ENST00000625635 SPDYE2BA6NHP3 402 aa9.77□□□□□ -0.85
LDHA-225ENST00000625635 SPDYE6P0CI01 402 aa9.77□□□□□ -0.85
LDHA-225ENST00000625635 SPDYE2Q495Y8 402 aa9.77□□□□□ -0.85
LDHA-225ENST00000625635 MKRN4PQ13434 485 aaPredicted RBP9.68□□□□□ -0.86
LDHA-225ENST00000625635 POTEHQ6S545 545 aa9.65□□□□□ -0.86
LDHA-225ENST00000625635 CHRDL2Q6WN34 429 aa9.65□□□□□ -0.86
LDHA-225ENST00000625635 REM2Q8IYK8 340 aaPredicted RBP9.64□□□□□ -0.87
LDHA-225ENST00000625635 ZNF692Q9BU19 519 aaPredicted RBP9.64□□□□□ -0.87
LDHA-225ENST00000625635 SSUH2Q9Y2M2 353 aa9.59□□□□□ -0.87
LDHA-225ENST00000625635 SPDYE1Q8NFV5 336 aaPredicted RBP9.56□□□□□ -0.88
LDHA-225ENST00000625635 ABCC9O60706 1549 aa9.56□□□□□ -0.88
LDHA-225ENST00000625635 PITPNM1O00562 1244 aa9.54□□□□□ -0.88
LDHA-225ENST00000625635 ZCCHC6Q5VYS8 1495 aaKnown RBP9.51□□□□□ -0.89
LDHA-225ENST00000625635 PABPN1Q86U42 306 aaKnown RBP eCLIP9.48□□□□□ -0.89
LDHA-225ENST00000625635 CLEC11AQ9Y240 323 aa9.47□□□□□ -0.89
LDHA-225ENST00000625635 SPDYE4A6NLX3 237 aa9.45□□□□□ -0.9
LDHA-225ENST00000625635 PIP4P2Q8N4L2 257 aa9.42□□□□□ -0.9
LDHA-225ENST00000625635 FXR2P51116 673 aaKnown RBP eCLIP9.41□□□□□ -0.9
LDHA-225ENST00000625635 DCAF1Q9Y4B6 1507 aa9.39□□□□□ -0.91
LDHA-225ENST00000625635 STAG3Q9UJ98 1225 aa9.38□□□□□ -0.91
LDHA-225ENST00000625635 PRR29P0C7W0 189 aa9.36□□□□□ -0.91
LDHA-225ENST00000625635 NACADO15069 1562 aa9.33□□□□□ -0.92
LDHA-225ENST00000625635 MYO15BQ96JP2 1530 aa9.33□□□□□ -0.92
LDHA-225ENST00000625635 DCAF8L2P0C7V8 631 aa9.32□□□□□ -0.92
LDHA-225ENST00000625635 PRKAR2AP13861 404 aaKnown RBP9.31□□□□□ -0.92
LDHA-225ENST00000625635 RB1CC1Q8TDY2 1594 aa9.3□□□□□ -0.92
LDHA-225ENST00000625635 HAX1O00165 279 aa9.25□□□□□ -0.93
LDHA-225ENST00000625635 UNC13AQ9UPW8 1703 aa9.22□□□□□ -0.93
LDHA-225ENST00000625635 PROM2Q8N271 834 aa9.2□□□□□ -0.94
LDHA-225ENST00000625635 CHADLQ6NUI6 762 aa9.19□□□□□ -0.94
LDHA-225ENST00000625635 SCRIBQ14160 1630 aa9.17□□□□□ -0.94
LDHA-225ENST00000625635 FKBP8Q14318 412 aa9.17□□□□□ -0.94
LDHA-225ENST00000625635 SP7Q8TDD2 431 aaPredicted RBP9.17□□□□□ -0.94
LDHA-225ENST00000625635 PLEKHG5O94827 1062 aa9.14□□□□□ -0.95
LDHA-225ENST00000625635 FARP1Q9Y4F1 1045 aaPredicted RBP9.13□□□□□ -0.95
LDHA-225ENST00000625635 C19orf67A6NJJ6 358 aa9.1□□□□□ -0.95
LDHA-225ENST00000625635 SHROOM4Q9ULL8 1493 aa9.09□□□□□ -0.95
LDHA-225ENST00000625635 NPM1P06748 294 aaKnown RBP eCLIP9.09□□□□□ -0.95
LDHA-225ENST00000625635 CREBZFQ9NS37 354 aa9.09□□□□□ -0.95
LDHA-225ENST00000625635 PAK3O75914 559 aaPredicted RBP9.06□□□□□ -0.96
LDHA-225ENST00000625635 CD44P16070 742 aaKnown RBP9.06□□□□□ -0.96
LDHA-225ENST00000625635 FBXO3Q9UK99 471 aa9.05□□□□□ -0.96
LDHA-225ENST00000625635 BICRAQ9NZM4 1560 aa9.04□□□□□ -0.96
LDHA-225ENST00000625635 CLCN6P51797 869 aa9.02□□□□□ -0.97
LDHA-225ENST00000625635 ZBTB47Q9UFB7 747 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms