RNA–Protein interactions for RNA: ENST00000539814.5

LDHA-217, Transcript of lactate dehydrogenase A, humanhuman

TSL 4

Gene LDHA, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-217ENST00000539814 AEBP2Q6ZN18 517 aaPredicted RBP24.2■■□□□ 1.46
LDHA-217ENST00000539814 CHIC1Q5VXU3 224 aa23.52■■□□□ 1.36
LDHA-217ENST00000539814 PHF23Q9BUL5 403 aaPredicted RBP20.68■□□□□ 0.9
LDHA-217ENST00000539814 SENP3Q9H4L4 574 aaPredicted RBP20.54■□□□□ 0.88
LDHA-217ENST00000539814 FOXD1Q16676 465 aa19.07■□□□□ 0.64
LDHA-217ENST00000539814 PLPPR3Q6T4P5 718 aa19.04■□□□□ 0.64
LDHA-217ENST00000539814 NISCHQ9Y2I1 1504 aa18.63■□□□□ 0.57
LDHA-217ENST00000539814 PPP6R1Q9UPN7 881 aa18.28■□□□□ 0.52
LDHA-217ENST00000539814 ADRA2BP18089 450 aa18.26■□□□□ 0.51
LDHA-217ENST00000539814 PIAS4Q8N2W9 510 aaPredicted RBP17.96■□□□□ 0.47
LDHA-217ENST00000539814 MSH5O43196 834 aa17.62■□□□□ 0.41
LDHA-217ENST00000539814 EHMT2Q96KQ7 1210 aa16.88■□□□□ 0.29
LDHA-217ENST00000539814 KCNA4P22459 653 aa16.77■□□□□ 0.28
LDHA-217ENST00000539814 PPP4R3CPQ6ZMV5 832 aa16.77■□□□□ 0.28
LDHA-217ENST00000539814 SCAF1Q9H7N4 1312 aaKnown RBP16.67■□□□□ 0.26
LDHA-217ENST00000539814 MAPK8IP2Q13387 824 aaPredicted RBP16.59■□□□□ 0.25
LDHA-217ENST00000539814 CCDC180Q9P1Z9 1646 aa16.45■□□□□ 0.22
LDHA-217ENST00000539814 DMRT2Q9Y5R5 561 aa16.38■□□□□ 0.21
LDHA-217ENST00000539814 CNKSR2Q8WXI2 1034 aa16.32■□□□□ 0.2
LDHA-217ENST00000539814 NCBP3Q53F19 620 aaKnown RBP16.29■□□□□ 0.2
LDHA-217ENST00000539814 POTEDQ86YR6 584 aa16.24■□□□□ 0.19
LDHA-217ENST00000539814 CSRNP3Q8WYN3 585 aa16.17■□□□□ 0.18
LDHA-217ENST00000539814 SLC4A1APQ9BWU0 796 aaKnown RBP16.14■□□□□ 0.17
LDHA-217ENST00000539814 NPM3O75607 178 aaKnown RBP16.07■□□□□ 0.16
LDHA-217ENST00000539814 RNF216Q9NWF9 866 aaPredicted RBP16.03■□□□□ 0.16
LDHA-217ENST00000539814 HOXD11P31277 338 aaPredicted RBP16■□□□□ 0.15
LDHA-217ENST00000539814 ABCC9O60706 1549 aa15.99■□□□□ 0.15
LDHA-217ENST00000539814 DCAF8L1A6NGE4 600 aa15.67■□□□□ 0.1
LDHA-217ENST00000539814 DNAJC5BQ9UF47 199 aa15.62■□□□□ 0.09
LDHA-217ENST00000539814 ZCCHC6Q5VYS8 1495 aaKnown RBP15.57■□□□□ 0.08
LDHA-217ENST00000539814 DCAF8L2P0C7V8 631 aa15.54■□□□□ 0.08
LDHA-217ENST00000539814 ZBTB22O15209 634 aa15.46■□□□□ 0.07
LDHA-217ENST00000539814 NACADO15069 1562 aa15.39■□□□□ 0.05
LDHA-217ENST00000539814 RB1CC1Q8TDY2 1594 aa15.38■□□□□ 0.05
LDHA-217ENST00000539814 DCAF1Q9Y4B6 1507 aa15.33■□□□□ 0.05
LDHA-217ENST00000539814 MYO15BQ96JP2 1530 aa15.29■□□□□ 0.04
LDHA-217ENST00000539814 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.24■□□□□ 0.03
LDHA-217ENST00000539814 SLC24A1O60721 1099 aa15.23■□□□□ 0.03
LDHA-217ENST00000539814 SLC4A2P04920 1241 aa15.21■□□□□ 0.03
LDHA-217ENST00000539814 UNC13AQ9UPW8 1703 aa15.14■□□□□ 0.01
LDHA-217ENST00000539814 FOXD4L1Q9NU39 408 aa15.14■□□□□ 0.01
LDHA-217ENST00000539814 SCRIBQ14160 1630 aa15.14■□□□□ 0.01
LDHA-217ENST00000539814 RNF39Q9H2S5 420 aa15.1■□□□□ 0.01
LDHA-217ENST00000539814 RTN4Q9NQC3 1192 aaKnown RBP15.06■□□□□ 0
LDHA-217ENST00000539814 AMER1Q5JTC6 1135 aaPredicted RBP15.03■□□□□ -0
LDHA-217ENST00000539814 U3KPZ7 1027 aaPredicted RBP15□□□□□ -0.01
LDHA-217ENST00000539814 PABPN1Q86U42 306 aaKnown RBP eCLIP14.99□□□□□ -0.01
LDHA-217ENST00000539814 BICRAQ9NZM4 1560 aa14.98□□□□□ -0.01
LDHA-217ENST00000539814 SHROOM4Q9ULL8 1493 aa14.97□□□□□ -0.01
LDHA-217ENST00000539814 C1QBPQ07021 282 aaKnown RBP14.9□□□□□ -0.02
LDHA-217ENST00000539814 MYCNP04198 464 aaPredicted RBP14.85□□□□□ -0.03
LDHA-217ENST00000539814 CACNB1Q02641 598 aaPredicted RBP14.77□□□□□ -0.05
LDHA-217ENST00000539814 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.75□□□□□ -0.05
LDHA-217ENST00000539814 HNRNPUL2Q1KMD3 747 aaKnown RBP14.75□□□□□ -0.05
LDHA-217ENST00000539814 SAMD1Q6SPF0 538 aaPredicted RBP14.7□□□□□ -0.06
LDHA-217ENST00000539814 APLP2Q06481 763 aa14.62□□□□□ -0.07
LDHA-217ENST00000539814 SPINK5Q9NQ38 1064 aaPredicted RBP14.61□□□□□ -0.07
LDHA-217ENST00000539814 FKBP8Q14318 412 aa14.58□□□□□ -0.08
LDHA-217ENST00000539814 CAPN15O75808 1086 aa14.55□□□□□ -0.08
LDHA-217ENST00000539814 CECR2Q9BXF3 1484 aa14.55□□□□□ -0.08
LDHA-217ENST00000539814 EIF4G1Q04637 1599 aaKnown RBP14.54□□□□□ -0.08
LDHA-217ENST00000539814 ATXN8OSP0DMR3 200 aa14.48□□□□□ -0.09
LDHA-217ENST00000539814 ATF5Q9Y2D1 282 aaPredicted RBP14.47□□□□□ -0.09
LDHA-217ENST00000539814 CC2D2AQ9P2K1 1620 aa14.45□□□□□ -0.1
LDHA-217ENST00000539814 TRHP20396 242 aaPredicted RBP14.45□□□□□ -0.1
LDHA-217ENST00000539814 ZNF219Q9P2Y4 722 aaPredicted RBP14.45□□□□□ -0.1
LDHA-217ENST00000539814 SMARCA4P51532 1647 aa14.44□□□□□ -0.1
LDHA-217ENST00000539814 MROH2BQ7Z745 1585 aa14.41□□□□□ -0.1
LDHA-217ENST00000539814 BAZ1AQ9NRL2 1556 aaPredicted RBP14.4□□□□□ -0.1
LDHA-217ENST00000539814 DSG3P32926 999 aa14.33□□□□□ -0.12
LDHA-217ENST00000539814 WIZO95785 1651 aa14.3□□□□□ -0.12
LDHA-217ENST00000539814 RSF1Q96T23 1441 aaPredicted RBP14.28□□□□□ -0.12
LDHA-217ENST00000539814 ATAD2BQ9ULI0 1458 aa14.27□□□□□ -0.12
LDHA-217ENST00000539814 ABCB7O75027 752 aa14.27□□□□□ -0.13
LDHA-217ENST00000539814 SMARCA2P51531 1590 aa14.24□□□□□ -0.13
LDHA-217ENST00000539814 PEG3Q9GZU2 1588 aa14.22□□□□□ -0.13
LDHA-217ENST00000539814 NCAPD3P42695 1498 aa14.19□□□□□ -0.14
LDHA-217ENST00000539814 POLA2Q14181 598 aa14.19□□□□□ -0.14
LDHA-217ENST00000539814 BAZ1BQ9UIG0 1483 aaKnown RBP14.18□□□□□ -0.14
LDHA-217ENST00000539814 HMGXB3Q12766 1538 aa14.15□□□□□ -0.14
LDHA-217ENST00000539814 SUPT5HO00267 1087 aaKnown RBP14.14□□□□□ -0.15
LDHA-217ENST00000539814 TOP2AP11388 1531 aaKnown RBP14.09□□□□□ -0.15
LDHA-217ENST00000539814 ZBTB12Q9Y330 459 aaPredicted RBP13.95□□□□□ -0.18
LDHA-217ENST00000539814 CCDC88BA6NC98 1476 aa13.93□□□□□ -0.18
LDHA-217ENST00000539814 NESP48681 1621 aa13.92□□□□□ -0.18
LDHA-217ENST00000539814 FBLN2P98095 1184 aa13.85□□□□□ -0.19
LDHA-217ENST00000539814 MKRN4PQ13434 485 aaPredicted RBP13.84□□□□□ -0.19
LDHA-217ENST00000539814 PLCB2Q00722 1185 aa13.83□□□□□ -0.2
LDHA-217ENST00000539814 LAMC3Q9Y6N6 1575 aa13.8□□□□□ -0.2
LDHA-217ENST00000539814 CADPSQ9ULU8 1353 aa13.8□□□□□ -0.2
LDHA-217ENST00000539814 CFTRP13569 1480 aa13.77□□□□□ -0.21
LDHA-217ENST00000539814 KIF21AQ7Z4S6 1674 aa13.75□□□□□ -0.21
LDHA-217ENST00000539814 OSCARQ8IYS5 282 aa13.74□□□□□ -0.21
LDHA-217ENST00000539814 FBXO3Q9UK99 471 aa13.74□□□□□ -0.21
LDHA-217ENST00000539814 PRDM2Q13029 1718 aa13.73□□□□□ -0.21
LDHA-217ENST00000539814 ERCC6Q03468 1493 aa13.73□□□□□ -0.21
LDHA-217ENST00000539814 FANCD2Q9BXW9 1451 aa13.68□□□□□ -0.22
LDHA-217ENST00000539814 PDS5BQ9NTI5 1447 aa13.68□□□□□ -0.22
LDHA-217ENST00000539814 HAP1P54257 671 aaPredicted RBP13.66□□□□□ -0.22
LDHA-217ENST00000539814 RBM42Q9BTD8 480 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms