RNA–Protein interactions for RNA: ENST00000548979.1

SLC38A1-205, Transcript of solute carrier family 38 member 1, humanhuman

TSL 4

Gene SLC38A1, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-205ENST00000548979 AEBP2Q6ZN18 517 aaPredicted RBP31.91■■■□□ 2.7
SLC38A1-205ENST00000548979 CHIC1Q5VXU3 224 aa30.82■■■□□ 2.52
SLC38A1-205ENST00000548979 PHF23Q9BUL5 403 aaPredicted RBP27.21■■□□□ 1.95
SLC38A1-205ENST00000548979 SENP3Q9H4L4 574 aaPredicted RBP26.9■■□□□ 1.9
SLC38A1-205ENST00000548979 FOXD1Q16676 465 aa25.13■■□□□ 1.61
SLC38A1-205ENST00000548979 PLPPR3Q6T4P5 718 aa24.86■■□□□ 1.57
SLC38A1-205ENST00000548979 PPP6R1Q9UPN7 881 aa24.11■■□□□ 1.45
SLC38A1-205ENST00000548979 ADRA2BP18089 450 aa24.04■■□□□ 1.44
SLC38A1-205ENST00000548979 PIAS4Q8N2W9 510 aaPredicted RBP23.58■■□□□ 1.37
SLC38A1-205ENST00000548979 POTEDQ86YR6 584 aa23.52■■□□□ 1.36
SLC38A1-205ENST00000548979 MSH5O43196 834 aa23.18■■□□□ 1.3
SLC38A1-205ENST00000548979 PPP4R3CPQ6ZMV5 832 aa21.96■■□□□ 1.11
SLC38A1-205ENST00000548979 MAPK8IP2Q13387 824 aaPredicted RBP21.92■■□□□ 1.1
SLC38A1-205ENST00000548979 SCAF1Q9H7N4 1312 aaKnown RBP21.74■■□□□ 1.07
SLC38A1-205ENST00000548979 DMRT2Q9Y5R5 561 aa21.49■■□□□ 1.03
SLC38A1-205ENST00000548979 CNKSR2Q8WXI2 1034 aa21.32■■□□□ 1
SLC38A1-205ENST00000548979 KCNA4P22459 653 aa21.29■■□□□ 1
SLC38A1-205ENST00000548979 NCBP3Q53F19 620 aaKnown RBP21.18■□□□□ 0.98
SLC38A1-205ENST00000548979 NPM3O75607 178 aaKnown RBP21.05■□□□□ 0.96
SLC38A1-205ENST00000548979 HOXD11P31277 338 aaPredicted RBP20.96■□□□□ 0.95
SLC38A1-205ENST00000548979 RNF216Q9NWF9 866 aaPredicted RBP20.96■□□□□ 0.95
SLC38A1-205ENST00000548979 DCAF8L1A6NGE4 600 aa20.59■□□□□ 0.89
SLC38A1-205ENST00000548979 DNAJC5BQ9UF47 199 aa20.33■□□□□ 0.85
SLC38A1-205ENST00000548979 NISCHQ9Y2I1 1504 aa20.22■□□□□ 0.83
SLC38A1-205ENST00000548979 CACNB1Q02641 598 aaPredicted RBP20.21■□□□□ 0.83
SLC38A1-205ENST00000548979 SLC4A1APQ9BWU0 796 aaKnown RBP20.14■□□□□ 0.81
SLC38A1-205ENST00000548979 SLC4A2P04920 1241 aa19.97■□□□□ 0.79
SLC38A1-205ENST00000548979 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.95■□□□□ 0.78
SLC38A1-205ENST00000548979 RNF39Q9H2S5 420 aa19.86■□□□□ 0.77
SLC38A1-205ENST00000548979 U3KPZ7 1027 aaPredicted RBP19.7■□□□□ 0.74
SLC38A1-205ENST00000548979 ZBTB22O15209 634 aa19.65■□□□□ 0.74
SLC38A1-205ENST00000548979 FOXD4L1Q9NU39 408 aa19.54■□□□□ 0.72
SLC38A1-205ENST00000548979 C1QBPQ07021 282 aaKnown RBP19.52■□□□□ 0.72
SLC38A1-205ENST00000548979 EHMT2Q96KQ7 1210 aa19.42■□□□□ 0.7
SLC38A1-205ENST00000548979 MYCNP04198 464 aaPredicted RBP19.34■□□□□ 0.69
SLC38A1-205ENST00000548979 CSRNP3Q8WYN3 585 aa19.31■□□□□ 0.68
SLC38A1-205ENST00000548979 SPINK5Q9NQ38 1064 aaPredicted RBP19.25■□□□□ 0.67
SLC38A1-205ENST00000548979 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.15■□□□□ 0.66
SLC38A1-205ENST00000548979 HNRNPUL2Q1KMD3 747 aaKnown RBP19.15■□□□□ 0.66
SLC38A1-205ENST00000548979 SAMD1Q6SPF0 538 aaPredicted RBP19.13■□□□□ 0.65
SLC38A1-205ENST00000548979 CAPN15O75808 1086 aa19.08■□□□□ 0.64
SLC38A1-205ENST00000548979 ATF5Q9Y2D1 282 aaPredicted RBP19.05■□□□□ 0.64
SLC38A1-205ENST00000548979 TRHP20396 242 aaPredicted RBP18.97■□□□□ 0.63
SLC38A1-205ENST00000548979 APLP2Q06481 763 aa18.94■□□□□ 0.62
SLC38A1-205ENST00000548979 DSG3P32926 999 aa18.85■□□□□ 0.61
SLC38A1-205ENST00000548979 ZNF219Q9P2Y4 722 aaPredicted RBP18.84■□□□□ 0.61
SLC38A1-205ENST00000548979 ATXN8OSP0DMR3 200 aa18.8■□□□□ 0.6
SLC38A1-205ENST00000548979 ABCB7O75027 752 aa18.78■□□□□ 0.6
SLC38A1-205ENST00000548979 POLA2Q14181 598 aa18.62■□□□□ 0.57
SLC38A1-205ENST00000548979 POTEHQ6S545 545 aa18.32■□□□□ 0.52
SLC38A1-205ENST00000548979 MKRN4PQ13434 485 aaPredicted RBP18.17■□□□□ 0.5
SLC38A1-205ENST00000548979 ZBTB12Q9Y330 459 aaPredicted RBP18.11■□□□□ 0.49
SLC38A1-205ENST00000548979 CCDC180Q9P1Z9 1646 aa18.04■□□□□ 0.48
SLC38A1-205ENST00000548979 FBLN2P98095 1184 aa18.02■□□□□ 0.48
SLC38A1-205ENST00000548979 OSCARQ8IYS5 282 aa18.02■□□□□ 0.48
SLC38A1-205ENST00000548979 ABCC9O60706 1549 aa17.81■□□□□ 0.44
SLC38A1-205ENST00000548979 RBM42Q9BTD8 480 aaKnown RBP17.8■□□□□ 0.44
SLC38A1-205ENST00000548979 SPDYE2BA6NHP3 402 aa17.69■□□□□ 0.42
SLC38A1-205ENST00000548979 SPDYE6P0CI01 402 aa17.69■□□□□ 0.42
SLC38A1-205ENST00000548979 SPDYE2Q495Y8 402 aa17.69■□□□□ 0.42
SLC38A1-205ENST00000548979 ZNF692Q9BU19 519 aaPredicted RBP17.64■□□□□ 0.41
SLC38A1-205ENST00000548979 AKT1S1Q96B36 256 aa17.6■□□□□ 0.41
SLC38A1-205ENST00000548979 SSUH2Q9Y2M2 353 aa17.59■□□□□ 0.41
SLC38A1-205ENST00000548979 SPDYE4A6NLX3 237 aa17.55■□□□□ 0.4
SLC38A1-205ENST00000548979 REM2Q8IYK8 340 aaPredicted RBP17.52■□□□□ 0.4
SLC38A1-205ENST00000548979 PABPN1Q86U42 306 aaKnown RBP eCLIP17.43■□□□□ 0.38
SLC38A1-205ENST00000548979 FKBP8Q14318 412 aa17.42■□□□□ 0.38
SLC38A1-205ENST00000548979 PITPNM1O00562 1244 aa17.34■□□□□ 0.37
SLC38A1-205ENST00000548979 CHRDL2Q6WN34 429 aa17.34■□□□□ 0.37
SLC38A1-205ENST00000548979 PROM2Q8N271 834 aa17.25■□□□□ 0.35
SLC38A1-205ENST00000548979 CLEC11AQ9Y240 323 aa17.22■□□□□ 0.35
SLC38A1-205ENST00000548979 SPDYE1Q8NFV5 336 aaPredicted RBP17.21■□□□□ 0.35
SLC38A1-205ENST00000548979 RB1CC1Q8TDY2 1594 aa17.11■□□□□ 0.33
SLC38A1-205ENST00000548979 NACADO15069 1562 aa17.06■□□□□ 0.32
SLC38A1-205ENST00000548979 PIP4P2Q8N4L2 257 aa17.05■□□□□ 0.32
SLC38A1-205ENST00000548979 DCAF8L2P0C7V8 631 aa17.03■□□□□ 0.32
SLC38A1-205ENST00000548979 FXR2P51116 673 aaKnown RBP eCLIP17.03■□□□□ 0.32
SLC38A1-205ENST00000548979 PRR29P0C7W0 189 aa17■□□□□ 0.31
SLC38A1-205ENST00000548979 STAG3Q9UJ98 1225 aa16.95■□□□□ 0.3
SLC38A1-205ENST00000548979 MYO15BQ96JP2 1530 aa16.93■□□□□ 0.3
SLC38A1-205ENST00000548979 SP7Q8TDD2 431 aaPredicted RBP16.93■□□□□ 0.3
SLC38A1-205ENST00000548979 CHADLQ6NUI6 762 aa16.91■□□□□ 0.3
SLC38A1-205ENST00000548979 PRKAR2AP13861 404 aaKnown RBP16.87■□□□□ 0.29
SLC38A1-205ENST00000548979 CREBZFQ9NS37 354 aa16.82■□□□□ 0.28
SLC38A1-205ENST00000548979 ZCCHC6Q5VYS8 1495 aaKnown RBP16.79■□□□□ 0.28
SLC38A1-205ENST00000548979 DCAF1Q9Y4B6 1507 aa16.77■□□□□ 0.28
SLC38A1-205ENST00000548979 FBXO3Q9UK99 471 aa16.69■□□□□ 0.26
SLC38A1-205ENST00000548979 MIER1Q8N108 512 aa16.66■□□□□ 0.26
SLC38A1-205ENST00000548979 HAX1O00165 279 aa16.65■□□□□ 0.26
SLC38A1-205ENST00000548979 MNX1P50219 401 aaPredicted RBP16.65■□□□□ 0.26
SLC38A1-205ENST00000548979 FARP1Q9Y4F1 1045 aaPredicted RBP16.65■□□□□ 0.26
SLC38A1-205ENST00000548979 VASPP50552 380 aaPredicted RBP16.59■□□□□ 0.25
SLC38A1-205ENST00000548979 PLCD3Q8N3E9 789 aa16.58■□□□□ 0.24
SLC38A1-205ENST00000548979 UNC13AQ9UPW8 1703 aa16.56■□□□□ 0.24
SLC38A1-205ENST00000548979 EVX2Q03828 476 aa16.52■□□□□ 0.24
SLC38A1-205ENST00000548979 BICRAQ9NZM4 1560 aa16.5■□□□□ 0.23
SLC38A1-205ENST00000548979 SHROOM4Q9ULL8 1493 aa16.47■□□□□ 0.23
SLC38A1-205ENST00000548979 C19orf67A6NJJ6 358 aa16.45■□□□□ 0.22
SLC38A1-205ENST00000548979 IFNLR1Q8IU57 520 aaPredicted RBP16.43■□□□□ 0.22
SLC38A1-205ENST00000548979 PLEKHG5O94827 1062 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms