Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.82■□□□□ 0.281e-9■■□□□ 11.9
LARP4Q71RC2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.793e-9■■□□□ 11.9
LARP4Q71RC2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.37■□□□□ 0.213e-9■■□□□ 11.9
LARP4Q71RC2 MRFAP1-204ENST00000512914 1982 nt16.19■□□□□ 0.183e-9■■□□□ 11.9
LARP4Q71RC2 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.213e-9■■□□□ 11.9
LARP4Q71RC2 ERBB2-221ENST00000584888 500 ntTSL 316.26■□□□□ 0.192e-16■■□□□ 11.9
LARP4Q71RC2 VKORC1-208ENST00000498155 870 ntTSL 5 BASIC8□□□□□ -1.138e-11■■□□□ 11.9
LARP4Q71RC2 FAAP20-207ENST00000420515 1544 ntTSL 1 (best)25.51■■□□□ 1.675e-7■■□□□ 11.9
LARP4Q71RC2 SPTAN1-211ENST00000625980 1713 ntTSL 212.48□□□□□ -0.412e-8■■□□□ 11.9
LARP4Q71RC2 SPTAN1-229ENST00000636010 1472 ntTSL 510.67□□□□□ -0.72e-8■■□□□ 11.9
LARP4Q71RC2 SPTAN1-201ENST00000358161 7794 ntTSL 1 (best) BASIC9.84□□□□□ -0.832e-8■■□□□ 11.9
LARP4Q71RC2 SPTAN1-220ENST00000630147 785 ntTSL 29.43□□□□□ -0.92e-8■■□□□ 11.9
LARP4Q71RC2 SPTAN1-221ENST00000630763 1503 ntTSL 29.16□□□□□ -0.942e-8■■□□□ 11.9
LARP4Q71RC2 SPTAN1-203ENST00000372739 7868 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.982e-8■■□□□ 11.9
LARP4Q71RC2 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.012e-8■■□□□ 11.9
LARP4Q71RC2 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC7.7□□□□□ -1.182e-8■■□□□ 11.9
LARP4Q71RC2 GAA-207ENST00000573556 756 ntTSL 217.59■□□□□ 0.412e-8■■□□□ 11.9
LARP4Q71RC2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.39■■□□□ 1.343e-7■■□□□ 11.9
LARP4Q71RC2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.993e-7■■□□□ 11.9
LARP4Q71RC2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.933e-7■■□□□ 11.9
LARP4Q71RC2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.043e-7■■□□□ 11.9
LARP4Q71RC2 COMT-201ENST00000207636 1319 ntTSL 513.98□□□□□ -0.173e-7■■□□□ 11.9
LARP4Q71RC2 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.173e-7■■□□□ 11.9
LARP4Q71RC2 ADRM1-202ENST00000462554 735 ntTSL 323.41■■□□□ 1.341e-6■■□□□ 11.9
LARP4Q71RC2 C4orf3-201ENST00000399075 2960 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.582e-10■■□□□ 11.9
LARP4Q71RC2 QPRT-204ENST00000564967 2199 nt13.3□□□□□ -0.288e-7■■□□□ 11.9
LARP4Q71RC2 COX7A2L-205ENST00000464443 895 ntTSL 316.86■□□□□ 0.292e-6■■□□□ 11.9
LARP4Q71RC2 COX7A2L-208ENST00000607768 614 ntTSL 38.41□□□□□ -1.062e-6■■□□□ 11.9
LARP4Q71RC2 LAMA5-211ENST00000492698 894 ntTSL 312.09□□□□□ -0.472e-13■■□□□ 11.9
LARP4Q71RC2 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.275e-18■■□□□ 11.9
LARP4Q71RC2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.28e-7■■□□□ 11.9
LARP4Q71RC2 PTK7-216ENST00000489707 1935 ntTSL 1 (best)15.43■□□□□ 0.068e-7■■□□□ 11.9
LARP4Q71RC2 PTK7-208ENST00000470019 4016 ntTSL 514.41□□□□□ -0.18e-7■■□□□ 11.9
LARP4Q71RC2 PTK7-201ENST00000230418 3958 ntTSL 1 (best)14.1□□□□□ -0.158e-7■■□□□ 11.9
LARP4Q71RC2 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.75□□□□□ -0.218e-7■■□□□ 11.9
LARP4Q71RC2 PTK7-215ENST00000487673 5282 ntTSL 213.62□□□□□ -0.238e-7■■□□□ 11.9
LARP4Q71RC2 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.61□□□□□ -0.238e-7■■□□□ 11.9
LARP4Q71RC2 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC12.84□□□□□ -0.358e-7■■□□□ 11.9
LARP4Q71RC2 DIAPH1-205ENST00000448451 2102 ntTSL 214.19□□□□□ -0.144e-10■■□□□ 11.9
LARP4Q71RC2 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.194e-6■■□□□ 11.9
LARP4Q71RC2 ELOVL1-216ENST00000621943 1625 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.354e-6■■□□□ 11.9
LARP4Q71RC2 ELOVL1-202ENST00000413844 1451 ntTSL 2 BASIC11.16□□□□□ -0.624e-6■■□□□ 11.9
LARP4Q71RC2 DIAPH1-208ENST00000476339 2606 ntTSL 211.14□□□□□ -0.634e-10■■□□□ 11.9
LARP4Q71RC2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.35■□□□□ 0.377e-12■■□□□ 11.9
LARP4Q71RC2 EIF3L-214ENST00000624234 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.617e-12■■□□□ 11.9
LARP4Q71RC2 EIF3L-201ENST00000381683 1599 ntTSL 2 BASIC10.92□□□□□ -0.667e-12■■□□□ 11.9
LARP4Q71RC2 EIF3L-211ENST00000476955 583 ntTSL 57.97□□□□□ -1.137e-12■■□□□ 11.9
LARP4Q71RC2 EIF3L-212ENST00000477256 1708 ntTSL 57.4□□□□□ -1.237e-12■■□□□ 11.9
LARP4Q71RC2 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.2□□□□□ -1.267e-12■■□□□ 11.9
LARP4Q71RC2 EIF3L-204ENST00000414316 581 ntTSL 56.03□□□□□ -1.447e-12■■□□□ 11.9
LARP4Q71RC2 EIF3L-205ENST00000436452 574 ntTSL 45.94□□□□□ -1.467e-12■■□□□ 11.9
LARP4Q71RC2 EIF3L-206ENST00000439997 787 ntTSL 55.75□□□□□ -1.497e-12■■□□□ 11.9
LARP4Q71RC2 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.362e-7■■□□□ 11.9
LARP4Q71RC2 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.532e-7■■□□□ 11.9
LARP4Q71RC2 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.82e-9■■□□□ 11.9
LARP4Q71RC2 RPS27A-210ENST00000495843 1159 ntTSL 58.21□□□□□ -1.17e-21■■□□□ 11.9
LARP4Q71RC2 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.64□□□□□ -1.515e-7■■□□□ 11.9
LARP4Q71RC2 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.686e-7■■□□□ 11.9
LARP4Q71RC2 TMEM214-208ENST00000460665 1967 ntTSL 213.91□□□□□ -0.185e-21■■□□□ 11.8
LARP4Q71RC2 TXN2-201ENST00000216185 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.543e-7■■□□□ 11.8
LARP4Q71RC2 TXN2-204ENST00000416967 1280 ntTSL 2 BASIC11.26□□□□□ -0.613e-7■■□□□ 11.8
LARP4Q71RC2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.34■■□□□ 1.012e-6■■□□□ 11.8
LARP4Q71RC2 HLA-B-256ENST00000639848 1089 ntBASIC18.48■□□□□ 0.557e-7■■□□□ 11.8
LARP4Q71RC2 HLA-B-257ENST00000640094 147 ntBASIC7.73□□□□□ -1.177e-7■■□□□ 11.8
LARP4Q71RC2 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.92■■□□□ 1.95e-7■■□□□ 11.8
LARP4Q71RC2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.49■■□□□ 1.835e-7■■□□□ 11.8
LARP4Q71RC2 KMT5A-207ENST00000478781 725 ntTSL 526.11■■□□□ 1.775e-7■■□□□ 11.8
LARP4Q71RC2 RASSF1-207ENST00000482447 1711 ntTSL 1 (best)20.97■□□□□ 0.951e-9■■□□□ 11.8
LARP4Q71RC2 SH3D21-202ENST00000474766 2043 ntTSL 1 (best)20.94■□□□□ 0.941e-9■■□□□ 11.8
LARP4Q71RC2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.8■□□□□ 0.927e-15■■□□□ 11.8
LARP4Q71RC2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.91e-9■■□□□ 11.8
LARP4Q71RC2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.775e-7■■□□□ 11.8
LARP4Q71RC2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.661e-9■■□□□ 11.8
LARP4Q71RC2 KMT5A-205ENST00000461103 1000 ntTSL 219.08■□□□□ 0.645e-7■■□□□ 11.8
LARP4Q71RC2 KMT5A-206ENST00000462311 747 ntTSL 518.6■□□□□ 0.575e-7■■□□□ 11.8
LARP4Q71RC2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.59■□□□□ 0.571e-9■■□□□ 11.8
LARP4Q71RC2 DDX5-205ENST00000577922 996 ntTSL 518.22■□□□□ 0.511e-9■■□□□ 11.8
LARP4Q71RC2 DDX5-228ENST00000584279 676 ntTSL 318.22■□□□□ 0.511e-9■■□□□ 11.8
LARP4Q71RC2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.07■□□□□ 0.481e-9■■□□□ 11.8
LARP4Q71RC2 AGAP3-209ENST00000469901 582 ntTSL 318.01■□□□□ 0.475e-7■■□□□ 11.8
LARP4Q71RC2 BSG-212ENST00000590218 545 ntTSL 217.93■□□□□ 0.465e-7■■□□□ 11.8
LARP4Q71RC2 CCNL1-226ENST00000631619 2457 ntTSL 517.87■□□□□ 0.457e-15■■□□□ 11.8
LARP4Q71RC2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.445e-7■■□□□ 11.8
LARP4Q71RC2 RASSF1-204ENST00000395117 1745 ntTSL 217.55■□□□□ 0.41e-9■■□□□ 11.8
LARP4Q71RC2 SH3D21-203ENST00000480549 3182 ntTSL 216.52■□□□□ 0.241e-9■■□□□ 11.8
LARP4Q71RC2 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.225e-7■■□□□ 11.8
LARP4Q71RC2 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.181e-9■■□□□ 11.8
LARP4Q71RC2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.9■□□□□ 0.141e-9■■□□□ 11.8
LARP4Q71RC2 BSG-210ENST00000576925 611 ntTSL 215.3■□□□□ 0.045e-7■■□□□ 11.8
LARP4Q71RC2 BSG-207ENST00000573216 545 ntTSL 415.26■□□□□ 0.035e-7■■□□□ 11.8
LARP4Q71RC2 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.037e-15■■□□□ 11.8
LARP4Q71RC2 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.1■□□□□ 0.012e-10■■□□□ 11.8
LARP4Q71RC2 DDX5-220ENST00000581806 576 ntTSL 415.01□□□□□ -0.011e-9■■□□□ 11.8
LARP4Q71RC2 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.017e-15■■□□□ 11.8
LARP4Q71RC2 BSG-213ENST00000613627 689 ntTSL 314.7□□□□□ -0.065e-7■■□□□ 11.8
LARP4Q71RC2 BSG-206ENST00000572899 582 ntTSL 214.68□□□□□ -0.065e-7■■□□□ 11.8
LARP4Q71RC2 DDX5-219ENST00000581697 580 ntTSL 514.57□□□□□ -0.081e-9■■□□□ 11.8
LARP4Q71RC2 DDX5-232ENST00000585111 1051 ntTSL 214.5□□□□□ -0.091e-9■■□□□ 11.8
LARP4Q71RC2 AGAP3-221ENST00000490097 604 ntTSL 414.39□□□□□ -0.115e-7■■□□□ 11.8
LARP4Q71RC2 CCNL1-212ENST00000470121 1889 ntTSL 1 (best)13.76□□□□□ -0.217e-15■■□□□ 11.8
Retrieved 100 of 15,922 protein–RNA pairs in 236.3 ms