RNA–Protein interactions for RNA: ENST00000495843.1

RPS27A-210, Transcript of ribosomal protein S27a, humanhuman

TSL 5

Gene RPS27A, Length 1,159 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27A-210ENST00000495843 AEBP2Q6ZN18 517 aaPredicted RBP28.02■■■□□ 2.08
RPS27A-210ENST00000495843 CHIC1Q5VXU3 224 aa27.14■■□□□ 1.94
RPS27A-210ENST00000495843 SENP3Q9H4L4 574 aaPredicted RBP23.86■■□□□ 1.41
RPS27A-210ENST00000495843 PHF23Q9BUL5 403 aaPredicted RBP23.82■■□□□ 1.4
RPS27A-210ENST00000495843 FOXD1Q16676 465 aa22.15■■□□□ 1.14
RPS27A-210ENST00000495843 PLPPR3Q6T4P5 718 aa21.96■■□□□ 1.11
RPS27A-210ENST00000495843 ADRA2BP18089 450 aa21.11■□□□□ 0.97
RPS27A-210ENST00000495843 PPP6R1Q9UPN7 881 aa21.11■□□□□ 0.97
RPS27A-210ENST00000495843 PIAS4Q8N2W9 510 aaPredicted RBP20.89■□□□□ 0.93
RPS27A-210ENST00000495843 MSH5O43196 834 aa20.55■□□□□ 0.88
RPS27A-210ENST00000495843 SCAF1Q9H7N4 1312 aaKnown RBP19.34■□□□□ 0.69
RPS27A-210ENST00000495843 PPP4R3CPQ6ZMV5 832 aa19.32■□□□□ 0.68
RPS27A-210ENST00000495843 MAPK8IP2Q13387 824 aaPredicted RBP19.22■□□□□ 0.67
RPS27A-210ENST00000495843 POTEDQ86YR6 584 aa19.13■□□□□ 0.65
RPS27A-210ENST00000495843 DMRT2Q9Y5R5 561 aa18.98■□□□□ 0.63
RPS27A-210ENST00000495843 NISCHQ9Y2I1 1504 aa18.84■□□□□ 0.61
RPS27A-210ENST00000495843 CNKSR2Q8WXI2 1034 aa18.82■□□□□ 0.6
RPS27A-210ENST00000495843 NCBP3Q53F19 620 aaKnown RBP18.77■□□□□ 0.6
RPS27A-210ENST00000495843 KCNA4P22459 653 aa18.59■□□□□ 0.57
RPS27A-210ENST00000495843 RNF216Q9NWF9 866 aaPredicted RBP18.51■□□□□ 0.55
RPS27A-210ENST00000495843 HOXD11P31277 338 aaPredicted RBP18.47■□□□□ 0.55
RPS27A-210ENST00000495843 NPM3O75607 178 aaKnown RBP18.45■□□□□ 0.54
RPS27A-210ENST00000495843 DCAF8L1A6NGE4 600 aa18.29■□□□□ 0.52
RPS27A-210ENST00000495843 DNAJC5BQ9UF47 199 aa17.86■□□□□ 0.45
RPS27A-210ENST00000495843 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.7■□□□□ 0.421e-7■□□□□ 10.2
RPS27A-210ENST00000495843 SLC4A1APQ9BWU0 796 aaKnown RBP17.69■□□□□ 0.42
RPS27A-210ENST00000495843 RNF39Q9H2S5 420 aa17.56■□□□□ 0.4
RPS27A-210ENST00000495843 SLC4A2P04920 1241 aa17.46■□□□□ 0.39
RPS27A-210ENST00000495843 CACNB1Q02641 598 aaPredicted RBP17.35■□□□□ 0.37
RPS27A-210ENST00000495843 C1QBPQ07021 282 aaKnown RBP17.35■□□□□ 0.37
RPS27A-210ENST00000495843 U3KPZ7 1027 aaPredicted RBP17.32■□□□□ 0.36
RPS27A-210ENST00000495843 FOXD4L1Q9NU39 408 aa17.18■□□□□ 0.34
RPS27A-210ENST00000495843 ZBTB22O15209 634 aa17.08■□□□□ 0.32
RPS27A-210ENST00000495843 MYCNP04198 464 aaPredicted RBP17.08■□□□□ 0.32
RPS27A-210ENST00000495843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.06■□□□□ 0.32
RPS27A-210ENST00000495843 HNRNPUL2Q1KMD3 747 aaKnown RBP17.06■□□□□ 0.32
RPS27A-210ENST00000495843 SAMD1Q6SPF0 538 aaPredicted RBP16.98■□□□□ 0.31
RPS27A-210ENST00000495843 APLP2Q06481 763 aa16.95■□□□□ 0.3
RPS27A-210ENST00000495843 EHMT2Q96KQ7 1210 aa16.95■□□□□ 0.3
RPS27A-210ENST00000495843 SPINK5Q9NQ38 1064 aaPredicted RBP16.93■□□□□ 0.3
RPS27A-210ENST00000495843 CAPN15O75808 1086 aa16.92■□□□□ 0.3
RPS27A-210ENST00000495843 CCDC180Q9P1Z9 1646 aa16.82■□□□□ 0.28
RPS27A-210ENST00000495843 TRHP20396 242 aaPredicted RBP16.78■□□□□ 0.28
RPS27A-210ENST00000495843 CSRNP3Q8WYN3 585 aa16.78■□□□□ 0.28
RPS27A-210ENST00000495843 ZNF219Q9P2Y4 722 aaPredicted RBP16.74■□□□□ 0.27
RPS27A-210ENST00000495843 DSG3P32926 999 aa16.62■□□□□ 0.25
RPS27A-210ENST00000495843 ATF5Q9Y2D1 282 aaPredicted RBP16.61■□□□□ 0.25
RPS27A-210ENST00000495843 ATXN8OSP0DMR3 200 aa16.58■□□□□ 0.24
RPS27A-210ENST00000495843 ABCB7O75027 752 aa16.57■□□□□ 0.24
RPS27A-210ENST00000495843 POLA2Q14181 598 aa16.42■□□□□ 0.22
RPS27A-210ENST00000495843 ABCC9O60706 1549 aa16.24■□□□□ 0.19
RPS27A-210ENST00000495843 ZBTB12Q9Y330 459 aaPredicted RBP16.15■□□□□ 0.18
RPS27A-210ENST00000495843 FBLN2P98095 1184 aa16.01■□□□□ 0.15
RPS27A-210ENST00000495843 RBM42Q9BTD8 480 aaKnown RBP15.9■□□□□ 0.14
RPS27A-210ENST00000495843 OSCARQ8IYS5 282 aa15.89■□□□□ 0.13
RPS27A-210ENST00000495843 MKRN4PQ13434 485 aaPredicted RBP15.87■□□□□ 0.13
RPS27A-210ENST00000495843 MYO15BQ96JP2 1530 aa15.78■□□□□ 0.12
RPS27A-210ENST00000495843 NACADO15069 1562 aa15.77■□□□□ 0.11
RPS27A-210ENST00000495843 RB1CC1Q8TDY2 1594 aa15.75■□□□□ 0.11
RPS27A-210ENST00000495843 ZCCHC6Q5VYS8 1495 aaKnown RBP15.72■□□□□ 0.11
RPS27A-210ENST00000495843 DCAF1Q9Y4B6 1507 aa15.69■□□□□ 0.1
RPS27A-210ENST00000495843 SPDYE2BA6NHP3 402 aa15.67■□□□□ 0.1
RPS27A-210ENST00000495843 SPDYE6P0CI01 402 aa15.67■□□□□ 0.1
RPS27A-210ENST00000495843 SPDYE2Q495Y8 402 aa15.67■□□□□ 0.1
RPS27A-210ENST00000495843 AKT1S1Q96B36 256 aa15.62■□□□□ 0.09
RPS27A-210ENST00000495843 ZNF692Q9BU19 519 aaPredicted RBP15.59■□□□□ 0.09
RPS27A-210ENST00000495843 SSUH2Q9Y2M2 353 aa15.49■□□□□ 0.07
RPS27A-210ENST00000495843 REM2Q8IYK8 340 aaPredicted RBP15.48■□□□□ 0.07
RPS27A-210ENST00000495843 DCAF8L2P0C7V8 631 aa15.47■□□□□ 0.07
RPS27A-210ENST00000495843 SPDYE4A6NLX3 237 aa15.45■□□□□ 0.06
RPS27A-210ENST00000495843 UNC13AQ9UPW8 1703 aa15.43■□□□□ 0.06
RPS27A-210ENST00000495843 PABPN1Q86U42 306 aaKnown RBP eCLIP15.38■□□□□ 0.05
RPS27A-210ENST00000495843 CHRDL2Q6WN34 429 aa15.32■□□□□ 0.04
RPS27A-210ENST00000495843 PITPNM1O00562 1244 aa15.31■□□□□ 0.04
RPS27A-210ENST00000495843 BICRAQ9NZM4 1560 aa15.3■□□□□ 0.04
RPS27A-210ENST00000495843 SPDYE1Q8NFV5 336 aaPredicted RBP15.29■□□□□ 0.04
RPS27A-210ENST00000495843 CLEC11AQ9Y240 323 aa15.27■□□□□ 0.04
RPS27A-210ENST00000495843 FKBP8Q14318 412 aa15.25■□□□□ 0.03
RPS27A-210ENST00000495843 SHROOM4Q9ULL8 1493 aa15.24■□□□□ 0.03
RPS27A-210ENST00000495843 SCRIBQ14160 1630 aa15.19■□□□□ 0.02
RPS27A-210ENST00000495843 POTEHQ6S545 545 aa15.11■□□□□ 0.01
RPS27A-210ENST00000495843 PRR29P0C7W0 189 aa15.07■□□□□ 0
RPS27A-210ENST00000495843 PROM2Q8N271 834 aa15.07■□□□□ 0
RPS27A-210ENST00000495843 STAG3Q9UJ98 1225 aa15.07■□□□□ 0
RPS27A-210ENST00000495843 PIP4P2Q8N4L2 257 aa15.06■□□□□ 0
RPS27A-210ENST00000495843 FXR2P51116 673 aaKnown RBP eCLIP15.03■□□□□ -0
RPS27A-210ENST00000495843 PRKAR2AP13861 404 aaKnown RBP14.94□□□□□ -0.02
RPS27A-210ENST00000495843 CHADLQ6NUI6 762 aa14.88□□□□□ -0.03
RPS27A-210ENST00000495843 EIF4G1Q04637 1599 aaKnown RBP14.86□□□□□ -0.03
RPS27A-210ENST00000495843 CC2D2AQ9P2K1 1620 aa14.77□□□□□ -0.04
RPS27A-210ENST00000495843 CREBZFQ9NS37 354 aa14.77□□□□□ -0.05
RPS27A-210ENST00000495843 FBXO3Q9UK99 471 aa14.76□□□□□ -0.05
RPS27A-210ENST00000495843 FARP1Q9Y4F1 1045 aaPredicted RBP14.71□□□□□ -0.05
RPS27A-210ENST00000495843 HAX1O00165 279 aa14.7□□□□□ -0.06
RPS27A-210ENST00000495843 MIER1Q8N108 512 aa14.7□□□□□ -0.06
RPS27A-210ENST00000495843 PLEKHG5O94827 1062 aa14.68□□□□□ -0.06
RPS27A-210ENST00000495843 PLCD3Q8N3E9 789 aa14.67□□□□□ -0.06
RPS27A-210ENST00000495843 CECR2Q9BXF3 1484 aa14.64□□□□□ -0.07
RPS27A-210ENST00000495843 SMARCA4P51532 1647 aa14.62□□□□□ -0.07
RPS27A-210ENST00000495843 BAZ1AQ9NRL2 1556 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms