Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 AF186192.3-201ENST00000583427 947 ntBASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 AL445675.2-201ENST00000620291 557 ntBASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.87■□□□□ 0.29
TMEM53Q6P2H8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 KRT16P1-201ENST00000399124 1418 ntBASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM53Q6P2H8 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms