Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
KCNA3P22001 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC22.5■■□□□ 1.19
KCNA3P22001 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
KCNA3P22001 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
KCNA3P22001 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
KCNA3P22001 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
KCNA3P22001 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
KCNA3P22001 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
KCNA3P22001 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
KCNA3P22001 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
KCNA3P22001 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
KCNA3P22001 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
KCNA3P22001 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
KCNA3P22001 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC22.49■■□□□ 1.19
KCNA3P22001 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
KCNA3P22001 BEX3-201ENST00000361298 921 ntTSL 2 BASIC22.49■■□□□ 1.19
KCNA3P22001 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
KCNA3P22001 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
KCNA3P22001 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC22.49■■□□□ 1.19
KCNA3P22001 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC22.49■■□□□ 1.19
KCNA3P22001 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
KCNA3P22001 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
KCNA3P22001 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC22.49■■□□□ 1.19
KCNA3P22001 RPS29-206ENST00000557111 488 ntTSL 2 BASIC22.49■■□□□ 1.19
KCNA3P22001 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC22.49■■□□□ 1.19
KCNA3P22001 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC22.49■■□□□ 1.19
KCNA3P22001 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
KCNA3P22001 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
KCNA3P22001 AC112907.3-201ENST00000577781 2400 ntBASIC22.49■■□□□ 1.19
KCNA3P22001 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
KCNA3P22001 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.49■■□□□ 1.19
KCNA3P22001 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
KCNA3P22001 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
KCNA3P22001 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
KCNA3P22001 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
KCNA3P22001 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
KCNA3P22001 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
KCNA3P22001 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
KCNA3P22001 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
KCNA3P22001 SOD2-201ENST00000337404 991 ntTSL 2 BASIC22.48■■□□□ 1.19
KCNA3P22001 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
KCNA3P22001 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC22.48■■□□□ 1.19
KCNA3P22001 AC005829.1-201ENST00000570002 483 ntBASIC22.48■■□□□ 1.19
KCNA3P22001 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
KCNA3P22001 COPE-211ENST00000600932 1144 ntTSL 5 BASIC22.48■■□□□ 1.19
KCNA3P22001 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC22.48■■□□□ 1.19
KCNA3P22001 AC064836.3-201ENST00000607928 673 ntBASIC22.48■■□□□ 1.19
KCNA3P22001 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC22.48■■□□□ 1.19
KCNA3P22001 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
KCNA3P22001 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
KCNA3P22001 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
KCNA3P22001 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
KCNA3P22001 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC22.48■■□□□ 1.19
KCNA3P22001 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
KCNA3P22001 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
KCNA3P22001 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
KCNA3P22001 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
KCNA3P22001 FP475955.4-201ENST00000623131 1990 ntBASIC22.47■■□□□ 1.19
KCNA3P22001 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
KCNA3P22001 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
KCNA3P22001 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC22.47■■□□□ 1.19
KCNA3P22001 NFYC-AS1-201ENST00000606277 1687 ntBASIC22.47■■□□□ 1.19
KCNA3P22001 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
KCNA3P22001 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
KCNA3P22001 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
KCNA3P22001 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
KCNA3P22001 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC22.47■■□□□ 1.19
KCNA3P22001 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC22.47■■□□□ 1.19
KCNA3P22001 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC22.47■■□□□ 1.19
KCNA3P22001 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC22.47■■□□□ 1.19
KCNA3P22001 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC22.47■■□□□ 1.19
KCNA3P22001 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC22.47■■□□□ 1.19
KCNA3P22001 RNF151-202ENST00000569210 853 ntTSL 2 BASIC22.47■■□□□ 1.19
KCNA3P22001 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC22.47■■□□□ 1.19
KCNA3P22001 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC22.47■■□□□ 1.19
KCNA3P22001 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC22.47■■□□□ 1.19
KCNA3P22001 AC009154.2-201ENST00000621177 724 ntBASIC22.47■■□□□ 1.19
KCNA3P22001 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
KCNA3P22001 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC22.47■■□□□ 1.19
KCNA3P22001 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
KCNA3P22001 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
KCNA3P22001 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
KCNA3P22001 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
KCNA3P22001 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC22.47■■□□□ 1.19
KCNA3P22001 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
KCNA3P22001 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.47■■□□□ 1.19
KCNA3P22001 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC22.47■■□□□ 1.19
KCNA3P22001 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
KCNA3P22001 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC22.46■■□□□ 1.19
KCNA3P22001 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
KCNA3P22001 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
KCNA3P22001 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
KCNA3P22001 FAM8A3P-201ENST00000427218 844 ntBASIC22.46■■□□□ 1.19
KCNA3P22001 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC22.46■■□□□ 1.19
KCNA3P22001 CFL1-202ENST00000524553 860 ntTSL 2 BASIC22.46■■□□□ 1.19
KCNA3P22001 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
KCNA3P22001 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC22.46■■□□□ 1.19
KCNA3P22001 AP000867.4-201ENST00000641616 219 ntBASIC22.46■■□□□ 1.19
KCNA3P22001 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
KCNA3P22001 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms