Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.42■■□□□ 1.02
CDKL5O76039 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDKL5O76039 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.42■■□□□ 1.02
CDKL5O76039 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.42■■□□□ 1.02
CDKL5O76039 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDKL5O76039 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDKL5O76039 SDHAP2-201ENST00000455183 2001 ntBASIC21.41■■□□□ 1.02
CDKL5O76039 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDKL5O76039 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDKL5O76039 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CDKL5O76039 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDKL5O76039 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDKL5O76039 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CDKL5O76039 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDKL5O76039 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.41■■□□□ 1.02
CDKL5O76039 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDKL5O76039 AC010240.3-201ENST00000607688 395 ntBASIC21.41■■□□□ 1.02
CDKL5O76039 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.41■■□□□ 1.02
CDKL5O76039 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CDKL5O76039 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.41■■□□□ 1.02
CDKL5O76039 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.41■■□□□ 1.02
CDKL5O76039 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDKL5O76039 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CDKL5O76039 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDKL5O76039 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.41■■□□□ 1.02
CDKL5O76039 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CDKL5O76039 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
CDKL5O76039 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.41■■□□□ 1.02
CDKL5O76039 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.41■■□□□ 1.02
CDKL5O76039 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CDKL5O76039 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDKL5O76039 AC135776.1-201ENST00000319817 2481 ntBASIC21.4■■□□□ 1.02
CDKL5O76039 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.4■■□□□ 1.02
CDKL5O76039 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21.4■■□□□ 1.02
CDKL5O76039 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDKL5O76039 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDKL5O76039 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.4■■□□□ 1.02
CDKL5O76039 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.4■■□□□ 1.02
CDKL5O76039 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
CDKL5O76039 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
CDKL5O76039 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDKL5O76039 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDKL5O76039 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CDKL5O76039 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.4■■□□□ 1.02
CDKL5O76039 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.4■■□□□ 1.02
CDKL5O76039 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.4■■□□□ 1.02
CDKL5O76039 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CDKL5O76039 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.4■■□□□ 1.02
CDKL5O76039 AC093677.2-201ENST00000600169 1863 ntBASIC21.4■■□□□ 1.02
CDKL5O76039 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDKL5O76039 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDKL5O76039 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDKL5O76039 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
CDKL5O76039 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CDKL5O76039 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CDKL5O76039 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.4■■□□□ 1.02
CDKL5O76039 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDKL5O76039 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDKL5O76039 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.39■■□□□ 1.02
CDKL5O76039 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDKL5O76039 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDKL5O76039 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDKL5O76039 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDKL5O76039 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.39■■□□□ 1.02
CDKL5O76039 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDKL5O76039 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.39■■□□□ 1.01
CDKL5O76039 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDKL5O76039 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDKL5O76039 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.39■■□□□ 1.01
CDKL5O76039 SEC1P-202ENST00000473944 940 ntBASIC21.39■■□□□ 1.01
CDKL5O76039 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.39■■□□□ 1.01
CDKL5O76039 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.39■■□□□ 1.01
CDKL5O76039 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.39■■□□□ 1.01
CDKL5O76039 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.39■■□□□ 1.01
CDKL5O76039 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
CDKL5O76039 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CDKL5O76039 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.39■■□□□ 1.01
CDKL5O76039 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDKL5O76039 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDKL5O76039 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDKL5O76039 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDKL5O76039 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.39■■□□□ 1.01
CDKL5O76039 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
CDKL5O76039 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDKL5O76039 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDKL5O76039 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.39■■□□□ 1.01
CDKL5O76039 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDKL5O76039 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.01
CDKL5O76039 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CDKL5O76039 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDKL5O76039 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDKL5O76039 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDKL5O76039 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDKL5O76039 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDKL5O76039 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDKL5O76039 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDKL5O76039 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.38■■□□□ 1.01
CDKL5O76039 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.38■■□□□ 1.01
CDKL5O76039 ESPNP-201ENST00000270691 2015 ntBASIC21.38■■□□□ 1.01
CDKL5O76039 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms