Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN2BO60939 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN2BO60939 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN2BO60939 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SCN2BO60939 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN2BO60939 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.49■□□□□ 0.39
SCN2BO60939 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN2BO60939 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN2BO60939 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN2BO60939 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.48■□□□□ 0.39
SCN2BO60939 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.48■□□□□ 0.39
SCN2BO60939 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCN2BO60939 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.48■□□□□ 0.39
SCN2BO60939 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SCN2BO60939 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCN2BO60939 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.48■□□□□ 0.39
SCN2BO60939 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCN2BO60939 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCN2BO60939 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCN2BO60939 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCN2BO60939 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCN2BO60939 ABHD17AP1-201ENST00000358206 933 ntBASIC17.48■□□□□ 0.39
SCN2BO60939 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCN2BO60939 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SCN2BO60939 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCN2BO60939 MCCD1P1-208ENST00000445732 328 ntBASIC17.48■□□□□ 0.39
SCN2BO60939 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCN2BO60939 AC142381.4-202ENST00000563973 229 ntBASIC17.48■□□□□ 0.39
SCN2BO60939 SLC25A1P4-201ENST00000567977 778 ntBASIC17.48■□□□□ 0.39
SCN2BO60939 MIR4674-201ENST00000582457 87 ntBASIC17.48■□□□□ 0.39
SCN2BO60939 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCN2BO60939 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCN2BO60939 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCN2BO60939 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCN2BO60939 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SCN2BO60939 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
SCN2BO60939 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCN2BO60939 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCN2BO60939 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCN2BO60939 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCN2BO60939 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCN2BO60939 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
SCN2BO60939 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.48■□□□□ 0.39
SCN2BO60939 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCN2BO60939 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCN2BO60939 AC034236.2-201ENST00000606662 1610 ntBASIC17.47■□□□□ 0.39
SCN2BO60939 AC138028.4-201ENST00000564984 1845 ntBASIC17.47■□□□□ 0.39
SCN2BO60939 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCN2BO60939 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SCN2BO60939 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SCN2BO60939 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCN2BO60939 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.47■□□□□ 0.39
SCN2BO60939 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SCN2BO60939 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCN2BO60939 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCN2BO60939 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCN2BO60939 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.47■□□□□ 0.39
SCN2BO60939 GCSHP5-201ENST00000443090 522 ntBASIC17.47■□□□□ 0.39
SCN2BO60939 AC097488.1-201ENST00000507834 756 ntBASIC17.47■□□□□ 0.39
SCN2BO60939 AC233702.5-201ENST00000584107 538 ntBASIC17.47■□□□□ 0.39
SCN2BO60939 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.47■□□□□ 0.39
SCN2BO60939 REXO1L10P-201ENST00000615707 1290 ntBASIC17.47■□□□□ 0.39
SCN2BO60939 REXO1L12P-201ENST00000622156 912 ntBASIC17.47■□□□□ 0.39
SCN2BO60939 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SCN2BO60939 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.47■□□□□ 0.39
SCN2BO60939 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCN2BO60939 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCN2BO60939 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.47■□□□□ 0.39
SCN2BO60939 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.47■□□□□ 0.39
SCN2BO60939 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.47■□□□□ 0.39
SCN2BO60939 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCN2BO60939 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCN2BO60939 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCN2BO60939 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SCN2BO60939 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCN2BO60939 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCN2BO60939 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCN2BO60939 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCN2BO60939 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCN2BO60939 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.47■□□□□ 0.39
SCN2BO60939 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCN2BO60939 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SCN2BO60939 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
SCN2BO60939 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCN2BO60939 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCN2BO60939 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.46■□□□□ 0.39
SCN2BO60939 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCN2BO60939 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SCN2BO60939 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.46■□□□□ 0.39
SCN2BO60939 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCN2BO60939 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCN2BO60939 AC012618.2-201ENST00000428058 849 ntBASIC17.46■□□□□ 0.39
SCN2BO60939 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCN2BO60939 SLC25A6P5-201ENST00000435663 894 ntBASIC17.46■□□□□ 0.39
SCN2BO60939 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.46■□□□□ 0.39
SCN2BO60939 UBE2SP1-201ENST00000450587 669 ntBASIC17.46■□□□□ 0.39
SCN2BO60939 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.46■□□□□ 0.39
SCN2BO60939 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.46■□□□□ 0.39
SCN2BO60939 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.46■□□□□ 0.39
SCN2BO60939 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms