Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AL355355.2-201ENST00000442321 338 ntBASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 LINC00896-202ENST00000609602 2128 ntBASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 AP003071.4-201ENST00000562276 1284 ntBASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 AL023803.3-201ENST00000615559 522 ntBASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV7S3A2A0A539 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 AL163051.1-201ENST00000569214 1512 ntBASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.72■□□□□ 0.59
TCRBV7S3A2A0A539 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 AP003041.3-201ENST00000527151 707 ntBASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 AP005242.2-201ENST00000580065 1175 ntBASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 AP001412.1-201ENST00000608405 714 ntBASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms