Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.65■■□□□ 1.86
PCDHA13Q9Y5I0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PCDHA13Q9Y5I0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
PCDHA13Q9Y5I0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.64■■□□□ 1.86
PCDHA13Q9Y5I0 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHA13Q9Y5I0 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.63■■□□□ 1.85
PCDHA13Q9Y5I0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.62■■□□□ 1.85
PCDHA13Q9Y5I0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.62■■□□□ 1.85
PCDHA13Q9Y5I0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHA13Q9Y5I0 AP004609.3-201ENST00000610705 1884 ntBASIC26.62■■□□□ 1.85
PCDHA13Q9Y5I0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHA13Q9Y5I0 MIR3665-201ENST00000578708 105 ntBASIC26.61■■□□□ 1.85
PCDHA13Q9Y5I0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHA13Q9Y5I0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.61■■□□□ 1.85
PCDHA13Q9Y5I0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHA13Q9Y5I0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.6■■□□□ 1.85
PCDHA13Q9Y5I0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.6■■□□□ 1.85
PCDHA13Q9Y5I0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.6■■□□□ 1.85
PCDHA13Q9Y5I0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHA13Q9Y5I0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHA13Q9Y5I0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHA13Q9Y5I0 AC020928.2-201ENST00000588717 2197 ntBASIC26.59■■□□□ 1.85
PCDHA13Q9Y5I0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHA13Q9Y5I0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.59■■□□□ 1.85
PCDHA13Q9Y5I0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.59■■□□□ 1.85
PCDHA13Q9Y5I0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
PCDHA13Q9Y5I0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.58■■□□□ 1.85
PCDHA13Q9Y5I0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHA13Q9Y5I0 AC092803.2-201ENST00000564287 1899 ntBASIC26.57■■□□□ 1.84
PCDHA13Q9Y5I0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.57■■□□□ 1.84
PCDHA13Q9Y5I0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHA13Q9Y5I0 DUSP8P4-201ENST00000399538 1761 ntBASIC26.56■■□□□ 1.84
PCDHA13Q9Y5I0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHA13Q9Y5I0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHA13Q9Y5I0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
PCDHA13Q9Y5I0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.55■■□□□ 1.84
PCDHA13Q9Y5I0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.55■■□□□ 1.84
PCDHA13Q9Y5I0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PCDHA13Q9Y5I0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
PCDHA13Q9Y5I0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PCDHA13Q9Y5I0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PCDHA13Q9Y5I0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHA13Q9Y5I0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHA13Q9Y5I0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHA13Q9Y5I0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.53■■□□□ 1.84
PCDHA13Q9Y5I0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHA13Q9Y5I0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.52■■□□□ 1.84
PCDHA13Q9Y5I0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.52■■□□□ 1.84
PCDHA13Q9Y5I0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHA13Q9Y5I0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHA13Q9Y5I0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.52■■□□□ 1.84
PCDHA13Q9Y5I0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.51■■□□□ 1.84
PCDHA13Q9Y5I0 AC110285.7-201ENST00000624417 1536 ntBASIC26.51■■□□□ 1.83
PCDHA13Q9Y5I0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHA13Q9Y5I0 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.51■■□□□ 1.83
PCDHA13Q9Y5I0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHA13Q9Y5I0 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHA13Q9Y5I0 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHA13Q9Y5I0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHA13Q9Y5I0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
PCDHA13Q9Y5I0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.49■■□□□ 1.83
PCDHA13Q9Y5I0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.49■■□□□ 1.83
PCDHA13Q9Y5I0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
PCDHA13Q9Y5I0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.48■■□□□ 1.83
PCDHA13Q9Y5I0 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDHA13Q9Y5I0 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
PCDHA13Q9Y5I0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDHA13Q9Y5I0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.47■■□□□ 1.83
PCDHA13Q9Y5I0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
PCDHA13Q9Y5I0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDHA13Q9Y5I0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDHA13Q9Y5I0 AP006261.1-201ENST00000584783 668 ntBASIC26.47■■□□□ 1.83
PCDHA13Q9Y5I0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDHA13Q9Y5I0 AC087741.3-201ENST00000624270 1347 ntBASIC26.46■■□□□ 1.83
PCDHA13Q9Y5I0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PCDHA13Q9Y5I0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
PCDHA13Q9Y5I0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
PCDHA13Q9Y5I0 AC142472.1-201ENST00000612013 1741 ntBASIC26.45■■□□□ 1.83
PCDHA13Q9Y5I0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
PCDHA13Q9Y5I0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
PCDHA13Q9Y5I0 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.44■■□□□ 1.82
PCDHA13Q9Y5I0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHA13Q9Y5I0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.44■■□□□ 1.82
PCDHA13Q9Y5I0 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHA13Q9Y5I0 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHA13Q9Y5I0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
PCDHA13Q9Y5I0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
PCDHA13Q9Y5I0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHA13Q9Y5I0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHA13Q9Y5I0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.43■■□□□ 1.82
PCDHA13Q9Y5I0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
PCDHA13Q9Y5I0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHA13Q9Y5I0 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHA13Q9Y5I0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHA13Q9Y5I0 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHA13Q9Y5I0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.42■■□□□ 1.82
PCDHA13Q9Y5I0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHA13Q9Y5I0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHA13Q9Y5I0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
PCDHA13Q9Y5I0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.41■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms