Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.92■■□□□ 1.42
PCDHGB4Q9UN71 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHGB4Q9UN71 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHGB4Q9UN71 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGB4Q9UN71 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGB4Q9UN71 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGB4Q9UN71 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC23.9■■□□□ 1.42
PCDHGB4Q9UN71 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGB4Q9UN71 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGB4Q9UN71 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGB4Q9UN71 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGB4Q9UN71 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHGB4Q9UN71 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHGB4Q9UN71 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHGB4Q9UN71 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
PCDHGB4Q9UN71 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
PCDHGB4Q9UN71 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGB4Q9UN71 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGB4Q9UN71 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGB4Q9UN71 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.88■■□□□ 1.41
PCDHGB4Q9UN71 AC020928.2-201ENST00000588717 2197 ntBASIC23.88■■□□□ 1.41
PCDHGB4Q9UN71 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.87■■□□□ 1.41
PCDHGB4Q9UN71 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
PCDHGB4Q9UN71 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
PCDHGB4Q9UN71 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.41
PCDHGB4Q9UN71 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGB4Q9UN71 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
PCDHGB4Q9UN71 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.87■■□□□ 1.41
PCDHGB4Q9UN71 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.87■■□□□ 1.41
PCDHGB4Q9UN71 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.87■■□□□ 1.41
PCDHGB4Q9UN71 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGB4Q9UN71 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGB4Q9UN71 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.86■■□□□ 1.41
PCDHGB4Q9UN71 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGB4Q9UN71 AC087741.3-201ENST00000624270 1347 ntBASIC23.85■■□□□ 1.41
PCDHGB4Q9UN71 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.85■■□□□ 1.41
PCDHGB4Q9UN71 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.85■■□□□ 1.41
PCDHGB4Q9UN71 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.85■■□□□ 1.41
PCDHGB4Q9UN71 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGB4Q9UN71 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGB4Q9UN71 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGB4Q9UN71 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGB4Q9UN71 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGB4Q9UN71 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGB4Q9UN71 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGB4Q9UN71 AC091060.1-201ENST00000623524 1766 ntBASIC23.84■■□□□ 1.41
PCDHGB4Q9UN71 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.84■■□□□ 1.41
PCDHGB4Q9UN71 AC018358.1-201ENST00000631079 1402 ntBASIC23.84■■□□□ 1.41
PCDHGB4Q9UN71 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGB4Q9UN71 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.83■■□□□ 1.41
PCDHGB4Q9UN71 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC23.83■■□□□ 1.41
PCDHGB4Q9UN71 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.83■■□□□ 1.41
PCDHGB4Q9UN71 AC044849.2-201ENST00000606596 710 ntBASIC23.83■■□□□ 1.41
PCDHGB4Q9UN71 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.83■■□□□ 1.41
PCDHGB4Q9UN71 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PCDHGB4Q9UN71 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGB4Q9UN71 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGB4Q9UN71 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGB4Q9UN71 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGB4Q9UN71 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.82■■□□□ 1.4
PCDHGB4Q9UN71 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.81■■□□□ 1.4
PCDHGB4Q9UN71 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHGB4Q9UN71 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHGB4Q9UN71 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGB4Q9UN71 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
PCDHGB4Q9UN71 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGB4Q9UN71 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGB4Q9UN71 AC093323.1-202ENST00000635031 2045 ntBASIC23.79■■□□□ 1.4
PCDHGB4Q9UN71 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGB4Q9UN71 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGB4Q9UN71 AL162393.1-201ENST00000437852 946 ntBASIC23.79■■□□□ 1.4
PCDHGB4Q9UN71 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.79■■□□□ 1.4
PCDHGB4Q9UN71 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
PCDHGB4Q9UN71 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGB4Q9UN71 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGB4Q9UN71 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGB4Q9UN71 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGB4Q9UN71 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.78■■□□□ 1.4
PCDHGB4Q9UN71 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.77■■□□□ 1.4
PCDHGB4Q9UN71 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
PCDHGB4Q9UN71 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGB4Q9UN71 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGB4Q9UN71 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGB4Q9UN71 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
PCDHGB4Q9UN71 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGB4Q9UN71 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
PCDHGB4Q9UN71 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHGB4Q9UN71 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.76■■□□□ 1.39
PCDHGB4Q9UN71 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHGB4Q9UN71 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHGB4Q9UN71 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHGB4Q9UN71 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGB4Q9UN71 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGB4Q9UN71 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGB4Q9UN71 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGB4Q9UN71 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGB4Q9UN71 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGB4Q9UN71 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGB4Q9UN71 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGB4Q9UN71 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms