Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.49■■□□□ 1.83
PCDHGC3Q9UN70 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.49■■□□□ 1.83
PCDHGC3Q9UN70 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDHGC3Q9UN70 MIR219A2-201ENST00000608502 1504 ntBASIC26.48■■□□□ 1.83
PCDHGC3Q9UN70 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.48■■□□□ 1.83
PCDHGC3Q9UN70 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
PCDHGC3Q9UN70 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDHGC3Q9UN70 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
PCDHGC3Q9UN70 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDHGC3Q9UN70 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.47■■□□□ 1.83
PCDHGC3Q9UN70 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
PCDHGC3Q9UN70 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDHGC3Q9UN70 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
PCDHGC3Q9UN70 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
PCDHGC3Q9UN70 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PCDHGC3Q9UN70 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
PCDHGC3Q9UN70 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.45■■□□□ 1.83
PCDHGC3Q9UN70 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.45■■□□□ 1.82
PCDHGC3Q9UN70 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PCDHGC3Q9UN70 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
PCDHGC3Q9UN70 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.44■■□□□ 1.82
PCDHGC3Q9UN70 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.43■■□□□ 1.82
PCDHGC3Q9UN70 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.43■■□□□ 1.82
PCDHGC3Q9UN70 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.43■■□□□ 1.82
PCDHGC3Q9UN70 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
PCDHGC3Q9UN70 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHGC3Q9UN70 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHGC3Q9UN70 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHGC3Q9UN70 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHGC3Q9UN70 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHGC3Q9UN70 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHGC3Q9UN70 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHGC3Q9UN70 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.42■■□□□ 1.82
PCDHGC3Q9UN70 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
PCDHGC3Q9UN70 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHGC3Q9UN70 WHAMMP3-201ENST00000611636 1609 ntBASIC26.42■■□□□ 1.82
PCDHGC3Q9UN70 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHGC3Q9UN70 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHGC3Q9UN70 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHGC3Q9UN70 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.41■■□□□ 1.82
PCDHGC3Q9UN70 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
PCDHGC3Q9UN70 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHGC3Q9UN70 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
PCDHGC3Q9UN70 AL449106.1-201ENST00000608517 1980 ntBASIC26.4■■□□□ 1.82
PCDHGC3Q9UN70 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PCDHGC3Q9UN70 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
PCDHGC3Q9UN70 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.4■■□□□ 1.82
PCDHGC3Q9UN70 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.4■■□□□ 1.82
PCDHGC3Q9UN70 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
PCDHGC3Q9UN70 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.39■■□□□ 1.82
PCDHGC3Q9UN70 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PCDHGC3Q9UN70 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.39■■□□□ 1.81
PCDHGC3Q9UN70 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
PCDHGC3Q9UN70 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
PCDHGC3Q9UN70 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.38■■□□□ 1.81
PCDHGC3Q9UN70 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.38■■□□□ 1.81
PCDHGC3Q9UN70 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHGC3Q9UN70 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHGC3Q9UN70 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHGC3Q9UN70 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
PCDHGC3Q9UN70 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
PCDHGC3Q9UN70 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.37■■□□□ 1.81
PCDHGC3Q9UN70 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.37■■□□□ 1.81
PCDHGC3Q9UN70 MIR639-201ENST00000384974 98 ntBASIC26.37■■□□□ 1.81
PCDHGC3Q9UN70 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
PCDHGC3Q9UN70 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.36■■□□□ 1.81
PCDHGC3Q9UN70 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHGC3Q9UN70 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.35■■□□□ 1.81
PCDHGC3Q9UN70 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.35■■□□□ 1.81
PCDHGC3Q9UN70 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHGC3Q9UN70 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHGC3Q9UN70 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHGC3Q9UN70 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.34■■□□□ 1.81
PCDHGC3Q9UN70 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHGC3Q9UN70 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHGC3Q9UN70 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHGC3Q9UN70 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.34■■□□□ 1.81
PCDHGC3Q9UN70 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHGC3Q9UN70 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHGC3Q9UN70 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
PCDHGC3Q9UN70 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHGC3Q9UN70 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHGC3Q9UN70 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.8
PCDHGC3Q9UN70 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
PCDHGC3Q9UN70 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHGC3Q9UN70 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHGC3Q9UN70 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.32■■□□□ 1.8
PCDHGC3Q9UN70 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHGC3Q9UN70 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHGC3Q9UN70 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHGC3Q9UN70 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.3■■□□□ 1.8
PCDHGC3Q9UN70 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
PCDHGC3Q9UN70 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHGC3Q9UN70 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHGC3Q9UN70 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHGC3Q9UN70 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHGC3Q9UN70 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHGC3Q9UN70 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.29■■□□□ 1.8
PCDHGC3Q9UN70 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.29■■□□□ 1.8
PCDHGC3Q9UN70 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms