Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.42■■□□□ 1.02
TREM2Q9NZC2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TREM2Q9NZC2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
TREM2Q9NZC2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
TREM2Q9NZC2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TREM2Q9NZC2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.41■■□□□ 1.02
TREM2Q9NZC2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
TREM2Q9NZC2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TREM2Q9NZC2 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TREM2Q9NZC2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TREM2Q9NZC2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.01
TREM2Q9NZC2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
TREM2Q9NZC2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TREM2Q9NZC2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
TREM2Q9NZC2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TREM2Q9NZC2 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
TREM2Q9NZC2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.38■■□□□ 1.01
TREM2Q9NZC2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
TREM2Q9NZC2 AC008813.1-201ENST00000536597 885 ntBASIC21.38■■□□□ 1.01
TREM2Q9NZC2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TREM2Q9NZC2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.38■■□□□ 1.01
TREM2Q9NZC2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TREM2Q9NZC2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TREM2Q9NZC2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TREM2Q9NZC2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TREM2Q9NZC2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.37■■□□□ 1.01
TREM2Q9NZC2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.37■■□□□ 1.01
TREM2Q9NZC2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
TREM2Q9NZC2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TREM2Q9NZC2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TREM2Q9NZC2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TREM2Q9NZC2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TREM2Q9NZC2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.36■■□□□ 1.01
TREM2Q9NZC2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
TREM2Q9NZC2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TREM2Q9NZC2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
TREM2Q9NZC2 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TREM2Q9NZC2 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TREM2Q9NZC2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TREM2Q9NZC2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
TREM2Q9NZC2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.35■■□□□ 1.01
TREM2Q9NZC2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TREM2Q9NZC2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TREM2Q9NZC2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TREM2Q9NZC2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.34■■□□□ 1.01
TREM2Q9NZC2 LINC01003-201ENST00000564834 1764 ntBASIC21.34■■□□□ 1.01
TREM2Q9NZC2 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TREM2Q9NZC2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TREM2Q9NZC2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TREM2Q9NZC2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.34■■□□□ 1.01
TREM2Q9NZC2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
TREM2Q9NZC2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.34■■□□□ 1.01
TREM2Q9NZC2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.34■■□□□ 1.01
TREM2Q9NZC2 AP002414.2-202ENST00000590929 1450 ntBASIC21.33■■□□□ 1.01
TREM2Q9NZC2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TREM2Q9NZC2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.33■■□□□ 1.01
TREM2Q9NZC2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
TREM2Q9NZC2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TREM2Q9NZC2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.32■■□□□ 1
TREM2Q9NZC2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
TREM2Q9NZC2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.32■■□□□ 1
TREM2Q9NZC2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.31■■□□□ 1
TREM2Q9NZC2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.31■■□□□ 1
TREM2Q9NZC2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TREM2Q9NZC2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.31■■□□□ 1
TREM2Q9NZC2 MIR219A2-201ENST00000608502 1504 ntBASIC21.31■■□□□ 1
TREM2Q9NZC2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.31■■□□□ 1
TREM2Q9NZC2 AL121749.1-202ENST00000609313 2153 ntBASIC21.31■■□□□ 1
TREM2Q9NZC2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TREM2Q9NZC2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.31■■□□□ 1
TREM2Q9NZC2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TREM2Q9NZC2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.3■■□□□ 1
TREM2Q9NZC2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
TREM2Q9NZC2 GPX1-201ENST00000419349 1106 ntBASIC21.3■■□□□ 1
TREM2Q9NZC2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.3■■□□□ 1
TREM2Q9NZC2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
TREM2Q9NZC2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TREM2Q9NZC2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TREM2Q9NZC2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TREM2Q9NZC2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.29■■□□□ 1
TREM2Q9NZC2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.29■■□□□ 1
TREM2Q9NZC2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.28■■□□□ 1
TREM2Q9NZC2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.28■■□□□ 1
TREM2Q9NZC2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TREM2Q9NZC2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.27■■□□□ 1
TREM2Q9NZC2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.27■■□□□ 1
TREM2Q9NZC2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TREM2Q9NZC2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.27■□□□□ 0.99
TREM2Q9NZC2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.26■□□□□ 0.99
TREM2Q9NZC2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
TREM2Q9NZC2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TREM2Q9NZC2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.26■□□□□ 0.99
TREM2Q9NZC2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TREM2Q9NZC2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TREM2Q9NZC2 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
TREM2Q9NZC2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TREM2Q9NZC2 AC148477.6-201ENST00000623746 465 ntBASIC21.25■□□□□ 0.99
TREM2Q9NZC2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TREM2Q9NZC2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TREM2Q9NZC2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms