Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.71■■□□□ 1.87
CISHQ9NSE2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
CISHQ9NSE2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CISHQ9NSE2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.71■■□□□ 1.87
CISHQ9NSE2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
CISHQ9NSE2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.71■■□□□ 1.87
CISHQ9NSE2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
CISHQ9NSE2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.87
CISHQ9NSE2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CISHQ9NSE2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CISHQ9NSE2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.7■■□□□ 1.86
CISHQ9NSE2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
CISHQ9NSE2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.69■■□□□ 1.86
CISHQ9NSE2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
CISHQ9NSE2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
CISHQ9NSE2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
CISHQ9NSE2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.69■■□□□ 1.86
CISHQ9NSE2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.69■■□□□ 1.86
CISHQ9NSE2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
CISHQ9NSE2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CISHQ9NSE2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CISHQ9NSE2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CISHQ9NSE2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
CISHQ9NSE2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CISHQ9NSE2 MIR4449-201ENST00000578365 66 ntBASIC26.68■■□□□ 1.86
CISHQ9NSE2 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CISHQ9NSE2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
CISHQ9NSE2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.67■■□□□ 1.86
CISHQ9NSE2 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CISHQ9NSE2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
CISHQ9NSE2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CISHQ9NSE2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CISHQ9NSE2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CISHQ9NSE2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
CISHQ9NSE2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CISHQ9NSE2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
CISHQ9NSE2 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
CISHQ9NSE2 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
CISHQ9NSE2 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CISHQ9NSE2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CISHQ9NSE2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CISHQ9NSE2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CISHQ9NSE2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CISHQ9NSE2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CISHQ9NSE2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
CISHQ9NSE2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
CISHQ9NSE2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
CISHQ9NSE2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.64■■□□□ 1.85
CISHQ9NSE2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.64■■□□□ 1.85
CISHQ9NSE2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CISHQ9NSE2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
CISHQ9NSE2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
CISHQ9NSE2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.62■■□□□ 1.85
CISHQ9NSE2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CISHQ9NSE2 WHAMMP3-201ENST00000611636 1609 ntBASIC26.61■■□□□ 1.85
CISHQ9NSE2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CISHQ9NSE2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.61■■□□□ 1.85
CISHQ9NSE2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
CISHQ9NSE2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CISHQ9NSE2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
CISHQ9NSE2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CISHQ9NSE2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CISHQ9NSE2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.6■■□□□ 1.85
CISHQ9NSE2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.6■■□□□ 1.85
CISHQ9NSE2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.6■■□□□ 1.85
CISHQ9NSE2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
CISHQ9NSE2 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
CISHQ9NSE2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CISHQ9NSE2 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.59■■□□□ 1.85
CISHQ9NSE2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CISHQ9NSE2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CISHQ9NSE2 AL449106.1-201ENST00000608517 1980 ntBASIC26.58■■□□□ 1.85
CISHQ9NSE2 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
CISHQ9NSE2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CISHQ9NSE2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
CISHQ9NSE2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CISHQ9NSE2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
CISHQ9NSE2 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.58■■□□□ 1.85
CISHQ9NSE2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CISHQ9NSE2 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.58■■□□□ 1.85
CISHQ9NSE2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CISHQ9NSE2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CISHQ9NSE2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.57■■□□□ 1.84
CISHQ9NSE2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
CISHQ9NSE2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.57■■□□□ 1.84
CISHQ9NSE2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
CISHQ9NSE2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CISHQ9NSE2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CISHQ9NSE2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CISHQ9NSE2 AL121749.1-202ENST00000609313 2153 ntBASIC26.56■■□□□ 1.84
CISHQ9NSE2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CISHQ9NSE2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
CISHQ9NSE2 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CISHQ9NSE2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.55■■□□□ 1.84
CISHQ9NSE2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CISHQ9NSE2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.55■■□□□ 1.84
CISHQ9NSE2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CISHQ9NSE2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.54■■□□□ 1.84
CISHQ9NSE2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CISHQ9NSE2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms