Protein–RNA interactions for Protein: Q9H977

WDR54, WD repeat-containing protein 54, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR54Q9H977 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
WDR54Q9H977 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
WDR54Q9H977 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.45■■□□□ 1.34
WDR54Q9H977 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.45■■□□□ 1.34
WDR54Q9H977 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
WDR54Q9H977 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
WDR54Q9H977 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
WDR54Q9H977 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
WDR54Q9H977 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.43■■□□□ 1.34
WDR54Q9H977 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
WDR54Q9H977 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
WDR54Q9H977 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
WDR54Q9H977 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.42■■□□□ 1.34
WDR54Q9H977 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.42■■□□□ 1.34
WDR54Q9H977 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.41■■□□□ 1.34
WDR54Q9H977 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
WDR54Q9H977 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
WDR54Q9H977 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
WDR54Q9H977 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
WDR54Q9H977 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.39■■□□□ 1.33
WDR54Q9H977 AC007029.1-201ENST00000604183 313 ntBASIC23.39■■□□□ 1.33
WDR54Q9H977 U85056.1-201ENST00000616429 682 ntBASIC23.39■■□□□ 1.33
WDR54Q9H977 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
WDR54Q9H977 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
WDR54Q9H977 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
WDR54Q9H977 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
WDR54Q9H977 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.38■■□□□ 1.33
WDR54Q9H977 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
WDR54Q9H977 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
WDR54Q9H977 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
WDR54Q9H977 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.37■■□□□ 1.33
WDR54Q9H977 AC012354.3-201ENST00000623734 483 ntBASIC23.37■■□□□ 1.33
WDR54Q9H977 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
WDR54Q9H977 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
WDR54Q9H977 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
WDR54Q9H977 SMPD5-203ENST00000639008 1464 ntBASIC23.36■■□□□ 1.33
WDR54Q9H977 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
WDR54Q9H977 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
WDR54Q9H977 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
WDR54Q9H977 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
WDR54Q9H977 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
WDR54Q9H977 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
WDR54Q9H977 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
WDR54Q9H977 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
WDR54Q9H977 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.35■■□□□ 1.33
WDR54Q9H977 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.35■■□□□ 1.33
WDR54Q9H977 AC025884.2-201ENST00000553429 711 ntBASIC23.35■■□□□ 1.33
WDR54Q9H977 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.35■■□□□ 1.33
WDR54Q9H977 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
WDR54Q9H977 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.34■■□□□ 1.33
WDR54Q9H977 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
WDR54Q9H977 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.34■■□□□ 1.33
WDR54Q9H977 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
WDR54Q9H977 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
WDR54Q9H977 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
WDR54Q9H977 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.34■■□□□ 1.33
WDR54Q9H977 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
WDR54Q9H977 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
WDR54Q9H977 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
WDR54Q9H977 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
WDR54Q9H977 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.32■■□□□ 1.32
WDR54Q9H977 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.32■■□□□ 1.32
WDR54Q9H977 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.32■■□□□ 1.32
WDR54Q9H977 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
WDR54Q9H977 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
WDR54Q9H977 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
WDR54Q9H977 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
WDR54Q9H977 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.31■■□□□ 1.32
WDR54Q9H977 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
WDR54Q9H977 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
WDR54Q9H977 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
WDR54Q9H977 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
WDR54Q9H977 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.3■■□□□ 1.32
WDR54Q9H977 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
WDR54Q9H977 KRT18P60-201ENST00000312876 1297 ntBASIC23.29■■□□□ 1.32
WDR54Q9H977 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.29■■□□□ 1.32
WDR54Q9H977 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
WDR54Q9H977 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
WDR54Q9H977 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.29■■□□□ 1.32
WDR54Q9H977 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.28■■□□□ 1.32
WDR54Q9H977 DRD5P2-201ENST00000421395 2012 ntBASIC23.28■■□□□ 1.32
WDR54Q9H977 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
WDR54Q9H977 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
WDR54Q9H977 WHAMMP3-201ENST00000611636 1609 ntBASIC23.27■■□□□ 1.32
WDR54Q9H977 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
WDR54Q9H977 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.27■■□□□ 1.32
WDR54Q9H977 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.27■■□□□ 1.32
WDR54Q9H977 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.26■■□□□ 1.31
WDR54Q9H977 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
WDR54Q9H977 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
WDR54Q9H977 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.25■■□□□ 1.31
WDR54Q9H977 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
WDR54Q9H977 RP9P-202ENST00000450133 1212 ntBASIC23.25■■□□□ 1.31
WDR54Q9H977 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
WDR54Q9H977 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
WDR54Q9H977 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
WDR54Q9H977 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
WDR54Q9H977 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
WDR54Q9H977 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
WDR54Q9H977 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms