Protein–RNA interactions for Protein: Q9H5U6

ZCCHC4, Zinc finger CCHC domain-containing protein 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC4Q9H5U6 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ZCCHC4Q9H5U6 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
ZCCHC4Q9H5U6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
ZCCHC4Q9H5U6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ZCCHC4Q9H5U6 WHAMMP2-203ENST00000563942 1603 ntBASIC21.82■■□□□ 1.08
ZCCHC4Q9H5U6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ZCCHC4Q9H5U6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZCCHC4Q9H5U6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ZCCHC4Q9H5U6 MIR6090-201ENST00000622481 60 ntBASIC21.81■■□□□ 1.08
ZCCHC4Q9H5U6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZCCHC4Q9H5U6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZCCHC4Q9H5U6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.8■■□□□ 1.08
ZCCHC4Q9H5U6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.8■■□□□ 1.08
ZCCHC4Q9H5U6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ZCCHC4Q9H5U6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
ZCCHC4Q9H5U6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.8■■□□□ 1.08
ZCCHC4Q9H5U6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
ZCCHC4Q9H5U6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ZCCHC4Q9H5U6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.79■■□□□ 1.08
ZCCHC4Q9H5U6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZCCHC4Q9H5U6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZCCHC4Q9H5U6 LINC00273-201ENST00000539813 1452 ntBASIC21.79■■□□□ 1.08
ZCCHC4Q9H5U6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.79■■□□□ 1.08
ZCCHC4Q9H5U6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
ZCCHC4Q9H5U6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZCCHC4Q9H5U6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.79■■□□□ 1.08
ZCCHC4Q9H5U6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
ZCCHC4Q9H5U6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ZCCHC4Q9H5U6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.78■■□□□ 1.08
ZCCHC4Q9H5U6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZCCHC4Q9H5U6 DUX4L28-201ENST00000623687 678 ntBASIC21.78■■□□□ 1.08
ZCCHC4Q9H5U6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
ZCCHC4Q9H5U6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
ZCCHC4Q9H5U6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZCCHC4Q9H5U6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZCCHC4Q9H5U6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
ZCCHC4Q9H5U6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZCCHC4Q9H5U6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ZCCHC4Q9H5U6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ZCCHC4Q9H5U6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.76■■□□□ 1.07
ZCCHC4Q9H5U6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZCCHC4Q9H5U6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZCCHC4Q9H5U6 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ZCCHC4Q9H5U6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZCCHC4Q9H5U6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZCCHC4Q9H5U6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZCCHC4Q9H5U6 AC093323.1-202ENST00000635031 2045 ntBASIC21.75■■□□□ 1.07
ZCCHC4Q9H5U6 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZCCHC4Q9H5U6 AC092803.2-201ENST00000564287 1899 ntBASIC21.75■■□□□ 1.07
ZCCHC4Q9H5U6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZCCHC4Q9H5U6 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ZCCHC4Q9H5U6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.74■■□□□ 1.07
ZCCHC4Q9H5U6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZCCHC4Q9H5U6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZCCHC4Q9H5U6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.73■■□□□ 1.07
ZCCHC4Q9H5U6 MIR3665-201ENST00000578708 105 ntBASIC21.73■■□□□ 1.07
ZCCHC4Q9H5U6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ZCCHC4Q9H5U6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.72■■□□□ 1.07
ZCCHC4Q9H5U6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ZCCHC4Q9H5U6 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZCCHC4Q9H5U6 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZCCHC4Q9H5U6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
ZCCHC4Q9H5U6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ZCCHC4Q9H5U6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZCCHC4Q9H5U6 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZCCHC4Q9H5U6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZCCHC4Q9H5U6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.71■■□□□ 1.07
ZCCHC4Q9H5U6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
ZCCHC4Q9H5U6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZCCHC4Q9H5U6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
ZCCHC4Q9H5U6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
ZCCHC4Q9H5U6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
ZCCHC4Q9H5U6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
ZCCHC4Q9H5U6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ZCCHC4Q9H5U6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.7■■□□□ 1.06
ZCCHC4Q9H5U6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ZCCHC4Q9H5U6 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.69■■□□□ 1.06
ZCCHC4Q9H5U6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ZCCHC4Q9H5U6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZCCHC4Q9H5U6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.69■■□□□ 1.06
ZCCHC4Q9H5U6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.68■■□□□ 1.06
ZCCHC4Q9H5U6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
ZCCHC4Q9H5U6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
ZCCHC4Q9H5U6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZCCHC4Q9H5U6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.67■■□□□ 1.06
ZCCHC4Q9H5U6 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZCCHC4Q9H5U6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ZCCHC4Q9H5U6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
ZCCHC4Q9H5U6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZCCHC4Q9H5U6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZCCHC4Q9H5U6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
ZCCHC4Q9H5U6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZCCHC4Q9H5U6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZCCHC4Q9H5U6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.66■■□□□ 1.06
ZCCHC4Q9H5U6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
ZCCHC4Q9H5U6 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZCCHC4Q9H5U6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.65■■□□□ 1.06
ZCCHC4Q9H5U6 AP006261.1-201ENST00000584783 668 ntBASIC21.65■■□□□ 1.06
ZCCHC4Q9H5U6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.65■■□□□ 1.06
ZCCHC4Q9H5U6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms