Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.86■■□□□ 1.25
TRIM2Q9C040 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM2Q9C040 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM2Q9C040 HLA-V-202ENST00000446817 847 ntBASIC22.85■■□□□ 1.25
TRIM2Q9C040 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.85■■□□□ 1.25
TRIM2Q9C040 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.85■■□□□ 1.25
TRIM2Q9C040 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
TRIM2Q9C040 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM2Q9C040 MBP-237ENST00000579129 1052 ntTSL 5 BASIC22.84■■□□□ 1.25
TRIM2Q9C040 LINC01971-201ENST00000617888 1048 ntBASIC22.84■■□□□ 1.25
TRIM2Q9C040 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM2Q9C040 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.84■■□□□ 1.25
TRIM2Q9C040 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM2Q9C040 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
TRIM2Q9C040 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.83■■□□□ 1.25
TRIM2Q9C040 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
TRIM2Q9C040 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
TRIM2Q9C040 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.82■■□□□ 1.24
TRIM2Q9C040 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
TRIM2Q9C040 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM2Q9C040 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.81■■□□□ 1.24
TRIM2Q9C040 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
TRIM2Q9C040 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.81■■□□□ 1.24
TRIM2Q9C040 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.81■■□□□ 1.24
TRIM2Q9C040 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
TRIM2Q9C040 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.8■■□□□ 1.24
TRIM2Q9C040 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRIM2Q9C040 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.8■■□□□ 1.24
TRIM2Q9C040 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.8■■□□□ 1.24
TRIM2Q9C040 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
TRIM2Q9C040 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.8■■□□□ 1.24
TRIM2Q9C040 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRIM2Q9C040 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
TRIM2Q9C040 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC22.79■■□□□ 1.24
TRIM2Q9C040 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.79■■□□□ 1.24
TRIM2Q9C040 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.78■■□□□ 1.24
TRIM2Q9C040 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRIM2Q9C040 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRIM2Q9C040 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.78■■□□□ 1.24
TRIM2Q9C040 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.78■■□□□ 1.24
TRIM2Q9C040 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
TRIM2Q9C040 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.77■■□□□ 1.24
TRIM2Q9C040 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TRIM2Q9C040 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.76■■□□□ 1.23
TRIM2Q9C040 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TRIM2Q9C040 DUX4L13-201ENST00000554103 1267 ntBASIC22.75■■□□□ 1.23
TRIM2Q9C040 DUX4L15-201ENST00000611059 1267 ntBASIC22.75■■□□□ 1.23
TRIM2Q9C040 DUX4L23-201ENST00000615195 1269 ntBASIC22.75■■□□□ 1.23
TRIM2Q9C040 DUX4L24-201ENST00000617576 1269 ntBASIC22.75■■□□□ 1.23
TRIM2Q9C040 DUX4L22-201ENST00000618238 1269 ntBASIC22.75■■□□□ 1.23
TRIM2Q9C040 DUX4L20-201ENST00000619712 1269 ntBASIC22.75■■□□□ 1.23
TRIM2Q9C040 DUX4L21-201ENST00000622058 1269 ntBASIC22.75■■□□□ 1.23
TRIM2Q9C040 DUX4L10-201ENST00000622460 1267 ntBASIC22.75■■□□□ 1.23
TRIM2Q9C040 DUX4L25-201ENST00000624915 1269 ntBASIC22.75■■□□□ 1.23
TRIM2Q9C040 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
TRIM2Q9C040 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.75■■□□□ 1.23
TRIM2Q9C040 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TRIM2Q9C040 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TRIM2Q9C040 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TRIM2Q9C040 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TRIM2Q9C040 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.73■■□□□ 1.23
TRIM2Q9C040 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TRIM2Q9C040 AL449106.1-201ENST00000608517 1980 ntBASIC22.72■■□□□ 1.23
TRIM2Q9C040 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TRIM2Q9C040 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.72■■□□□ 1.23
TRIM2Q9C040 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM2Q9C040 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
TRIM2Q9C040 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
TRIM2Q9C040 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM2Q9C040 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM2Q9C040 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
TRIM2Q9C040 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRIM2Q9C040 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.7■■□□□ 1.22
TRIM2Q9C040 DUX4L11-201ENST00000611504 1267 ntBASIC22.7■■□□□ 1.22
TRIM2Q9C040 DUX4L12-201ENST00000614593 1267 ntBASIC22.7■■□□□ 1.22
TRIM2Q9C040 DUX4L14-201ENST00000621227 1267 ntBASIC22.7■■□□□ 1.22
TRIM2Q9C040 WHAMMP3-201ENST00000611636 1609 ntBASIC22.7■■□□□ 1.22
TRIM2Q9C040 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRIM2Q9C040 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.7■■□□□ 1.22
TRIM2Q9C040 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TRIM2Q9C040 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TRIM2Q9C040 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
TRIM2Q9C040 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRIM2Q9C040 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
TRIM2Q9C040 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.68■■□□□ 1.22
TRIM2Q9C040 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM2Q9C040 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.68■■□□□ 1.22
TRIM2Q9C040 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.68■■□□□ 1.22
TRIM2Q9C040 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
TRIM2Q9C040 AC008813.1-201ENST00000536597 885 ntBASIC22.67■■□□□ 1.22
TRIM2Q9C040 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.67■■□□□ 1.22
TRIM2Q9C040 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRIM2Q9C040 AP004609.3-201ENST00000610705 1884 ntBASIC22.66■■□□□ 1.22
TRIM2Q9C040 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
TRIM2Q9C040 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.66■■□□□ 1.22
TRIM2Q9C040 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
TRIM2Q9C040 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.65■■□□□ 1.22
TRIM2Q9C040 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.65■■□□□ 1.22
TRIM2Q9C040 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM2Q9C040 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms