Protein–RNA interactions for Protein: Q9BWD3

RTL8A, Retrotransposon Gag-like protein 8A, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8AQ9BWD3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.3■■□□□ 1
RTL8AQ9BWD3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTL8AQ9BWD3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
RTL8AQ9BWD3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.29■■□□□ 1
RTL8AQ9BWD3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
RTL8AQ9BWD3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RTL8AQ9BWD3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RTL8AQ9BWD3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RTL8AQ9BWD3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RTL8AQ9BWD3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.28■■□□□ 1
RTL8AQ9BWD3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RTL8AQ9BWD3 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTL8AQ9BWD3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
RTL8AQ9BWD3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTL8AQ9BWD3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTL8AQ9BWD3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
RTL8AQ9BWD3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RTL8AQ9BWD3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTL8AQ9BWD3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTL8AQ9BWD3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.26■□□□□ 0.99
RTL8AQ9BWD3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RTL8AQ9BWD3 CR559946.2-201ENST00000623684 991 ntBASIC21.26■□□□□ 0.99
RTL8AQ9BWD3 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RTL8AQ9BWD3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTL8AQ9BWD3 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTL8AQ9BWD3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RTL8AQ9BWD3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTL8AQ9BWD3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.25■□□□□ 0.99
RTL8AQ9BWD3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTL8AQ9BWD3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.24■□□□□ 0.99
RTL8AQ9BWD3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTL8AQ9BWD3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
RTL8AQ9BWD3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
RTL8AQ9BWD3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTL8AQ9BWD3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.23■□□□□ 0.99
RTL8AQ9BWD3 MIR7108-201ENST00000614319 87 ntBASIC21.23■□□□□ 0.99
RTL8AQ9BWD3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.23■□□□□ 0.99
RTL8AQ9BWD3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTL8AQ9BWD3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
RTL8AQ9BWD3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTL8AQ9BWD3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTL8AQ9BWD3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.22■□□□□ 0.99
RTL8AQ9BWD3 MIR3648-2-201ENST00000581792 180 ntBASIC21.22■□□□□ 0.99
RTL8AQ9BWD3 MIR3648-1-201ENST00000615959 180 ntBASIC21.22■□□□□ 0.99
RTL8AQ9BWD3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RTL8AQ9BWD3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
RTL8AQ9BWD3 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.22■□□□□ 0.99
RTL8AQ9BWD3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
RTL8AQ9BWD3 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RTL8AQ9BWD3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RTL8AQ9BWD3 AC148477.6-201ENST00000623746 465 ntBASIC21.21■□□□□ 0.99
RTL8AQ9BWD3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.2■□□□□ 0.99
RTL8AQ9BWD3 WHAMMP3-201ENST00000611636 1609 ntBASIC21.2■□□□□ 0.98
RTL8AQ9BWD3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTL8AQ9BWD3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTL8AQ9BWD3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RTL8AQ9BWD3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
RTL8AQ9BWD3 MIR219A2-201ENST00000608502 1504 ntBASIC21.19■□□□□ 0.98
RTL8AQ9BWD3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.18■□□□□ 0.98
RTL8AQ9BWD3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTL8AQ9BWD3 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTL8AQ9BWD3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.18■□□□□ 0.98
RTL8AQ9BWD3 AC016575.1-201ENST00000607026 382 ntBASIC21.18■□□□□ 0.98
RTL8AQ9BWD3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTL8AQ9BWD3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTL8AQ9BWD3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTL8AQ9BWD3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.17■□□□□ 0.98
RTL8AQ9BWD3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTL8AQ9BWD3 HLA-V-202ENST00000446817 847 ntBASIC21.17■□□□□ 0.98
RTL8AQ9BWD3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.17■□□□□ 0.98
RTL8AQ9BWD3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
RTL8AQ9BWD3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.17■□□□□ 0.98
RTL8AQ9BWD3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RTL8AQ9BWD3 AL449106.1-201ENST00000608517 1980 ntBASIC21.17■□□□□ 0.98
RTL8AQ9BWD3 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RTL8AQ9BWD3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
RTL8AQ9BWD3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
RTL8AQ9BWD3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.16■□□□□ 0.98
RTL8AQ9BWD3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTL8AQ9BWD3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTL8AQ9BWD3 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTL8AQ9BWD3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RTL8AQ9BWD3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTL8AQ9BWD3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.15■□□□□ 0.98
RTL8AQ9BWD3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RTL8AQ9BWD3 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RTL8AQ9BWD3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.14■□□□□ 0.98
RTL8AQ9BWD3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RTL8AQ9BWD3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RTL8AQ9BWD3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.14■□□□□ 0.97
RTL8AQ9BWD3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTL8AQ9BWD3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTL8AQ9BWD3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTL8AQ9BWD3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTL8AQ9BWD3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTL8AQ9BWD3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
RTL8AQ9BWD3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTL8AQ9BWD3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTL8AQ9BWD3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RTL8AQ9BWD3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms