Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXC2Q99958 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.23■□□□□ 0.99
FOXC2Q99958 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXC2Q99958 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXC2Q99958 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
FOXC2Q99958 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXC2Q99958 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXC2Q99958 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.22■□□□□ 0.99
FOXC2Q99958 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXC2Q99958 AC025884.2-201ENST00000553429 711 ntBASIC21.22■□□□□ 0.99
FOXC2Q99958 MIR6765-201ENST00000614092 87 ntBASIC21.22■□□□□ 0.99
FOXC2Q99958 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXC2Q99958 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXC2Q99958 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXC2Q99958 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
FOXC2Q99958 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXC2Q99958 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXC2Q99958 AL356441.2-201ENST00000443009 864 ntBASIC21.21■□□□□ 0.99
FOXC2Q99958 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXC2Q99958 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXC2Q99958 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.21■□□□□ 0.99
FOXC2Q99958 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.2■□□□□ 0.98
FOXC2Q99958 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXC2Q99958 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
FOXC2Q99958 MIR4508-201ENST00000584178 70 ntBASIC21.2■□□□□ 0.98
FOXC2Q99958 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXC2Q99958 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXC2Q99958 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXC2Q99958 ST7-205ENST00000393446 2114 ntTSL 5 BASIC21.19■□□□□ 0.98
FOXC2Q99958 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.19■□□□□ 0.98
FOXC2Q99958 SPCS2P3-201ENST00000500401 656 ntBASIC21.19■□□□□ 0.98
FOXC2Q99958 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
FOXC2Q99958 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXC2Q99958 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
FOXC2Q99958 RAP2CP1-202ENST00000605179 643 ntBASIC21.19■□□□□ 0.98
FOXC2Q99958 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.19■□□□□ 0.98
FOXC2Q99958 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
FOXC2Q99958 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
FOXC2Q99958 AC093536.1-201ENST00000569153 554 ntBASIC21.18■□□□□ 0.98
FOXC2Q99958 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
FOXC2Q99958 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.18■□□□□ 0.98
FOXC2Q99958 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.18■□□□□ 0.98
FOXC2Q99958 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXC2Q99958 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
FOXC2Q99958 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
FOXC2Q99958 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.17■□□□□ 0.98
FOXC2Q99958 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
FOXC2Q99958 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
FOXC2Q99958 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
FOXC2Q99958 AL359258.2-201ENST00000564063 1566 ntBASIC21.17■□□□□ 0.98
FOXC2Q99958 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXC2Q99958 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXC2Q99958 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
FOXC2Q99958 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.16■□□□□ 0.98
FOXC2Q99958 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.16■□□□□ 0.98
FOXC2Q99958 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FOXC2Q99958 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXC2Q99958 ST7-202ENST00000323984 2142 ntTSL 5 BASIC21.15■□□□□ 0.98
FOXC2Q99958 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXC2Q99958 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXC2Q99958 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FOXC2Q99958 ST7-207ENST00000393449 2127 ntTSL 5 BASIC21.15■□□□□ 0.98
FOXC2Q99958 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.15■□□□□ 0.98
FOXC2Q99958 PVT1_1.1-201ENST00000615125 194 ntBASIC21.15■□□□□ 0.98
FOXC2Q99958 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FOXC2Q99958 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FOXC2Q99958 AC018755.3-202ENST00000596210 929 ntBASIC21.14■□□□□ 0.97
FOXC2Q99958 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FOXC2Q99958 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FOXC2Q99958 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXC2Q99958 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
FOXC2Q99958 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.13■□□□□ 0.97
FOXC2Q99958 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.13■□□□□ 0.97
FOXC2Q99958 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.13■□□□□ 0.97
FOXC2Q99958 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
FOXC2Q99958 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
FOXC2Q99958 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXC2Q99958 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
FOXC2Q99958 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FOXC2Q99958 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXC2Q99958 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.12■□□□□ 0.97
FOXC2Q99958 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.12■□□□□ 0.97
FOXC2Q99958 AL031848.2-201ENST00000607670 837 ntBASIC21.12■□□□□ 0.97
FOXC2Q99958 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
FOXC2Q99958 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXC2Q99958 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.12■□□□□ 0.97
FOXC2Q99958 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXC2Q99958 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
FOXC2Q99958 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXC2Q99958 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
FOXC2Q99958 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.11■□□□□ 0.97
FOXC2Q99958 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXC2Q99958 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.11■□□□□ 0.97
FOXC2Q99958 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXC2Q99958 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.11■□□□□ 0.97
FOXC2Q99958 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
FOXC2Q99958 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXC2Q99958 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.1■□□□□ 0.97
FOXC2Q99958 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.1■□□□□ 0.97
FOXC2Q99958 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms