Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.4■□□□□ 0.54
ODF3Q96PU9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ODF3Q96PU9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.39■□□□□ 0.53
ODF3Q96PU9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.39■□□□□ 0.53
ODF3Q96PU9 AL449106.1-201ENST00000608517 1980 ntBASIC18.39■□□□□ 0.53
ODF3Q96PU9 WHAMMP3-201ENST00000611636 1609 ntBASIC18.38■□□□□ 0.53
ODF3Q96PU9 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC18.38■□□□□ 0.53
ODF3Q96PU9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ODF3Q96PU9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
ODF3Q96PU9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.38■□□□□ 0.53
ODF3Q96PU9 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.38■□□□□ 0.53
ODF3Q96PU9 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.37■□□□□ 0.53
ODF3Q96PU9 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.37■□□□□ 0.53
ODF3Q96PU9 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ODF3Q96PU9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ODF3Q96PU9 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.37■□□□□ 0.53
ODF3Q96PU9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ODF3Q96PU9 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.37■□□□□ 0.53
ODF3Q96PU9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ODF3Q96PU9 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ODF3Q96PU9 RPS2P35-201ENST00000443417 897 ntBASIC18.36■□□□□ 0.53
ODF3Q96PU9 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ODF3Q96PU9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ODF3Q96PU9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ODF3Q96PU9 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.35■□□□□ 0.53
ODF3Q96PU9 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ODF3Q96PU9 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ODF3Q96PU9 AC142472.1-201ENST00000612013 1741 ntBASIC18.35■□□□□ 0.53
ODF3Q96PU9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ODF3Q96PU9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ODF3Q96PU9 AP004609.3-201ENST00000610705 1884 ntBASIC18.34■□□□□ 0.53
ODF3Q96PU9 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ODF3Q96PU9 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ODF3Q96PU9 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.34■□□□□ 0.53
ODF3Q96PU9 AC008813.1-201ENST00000536597 885 ntBASIC18.33■□□□□ 0.52
ODF3Q96PU9 DUX4L13-201ENST00000554103 1267 ntBASIC18.33■□□□□ 0.52
ODF3Q96PU9 DUX4L15-201ENST00000611059 1267 ntBASIC18.33■□□□□ 0.52
ODF3Q96PU9 DUX4L23-201ENST00000615195 1269 ntBASIC18.33■□□□□ 0.52
ODF3Q96PU9 DUX4L24-201ENST00000617576 1269 ntBASIC18.33■□□□□ 0.52
ODF3Q96PU9 DUX4L22-201ENST00000618238 1269 ntBASIC18.33■□□□□ 0.52
ODF3Q96PU9 DUX4L20-201ENST00000619712 1269 ntBASIC18.33■□□□□ 0.52
ODF3Q96PU9 DUX4L21-201ENST00000622058 1269 ntBASIC18.33■□□□□ 0.52
ODF3Q96PU9 DUX4L10-201ENST00000622460 1267 ntBASIC18.33■□□□□ 0.52
ODF3Q96PU9 DUX4L25-201ENST00000624915 1269 ntBASIC18.33■□□□□ 0.52
ODF3Q96PU9 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.32■□□□□ 0.52
ODF3Q96PU9 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ODF3Q96PU9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ODF3Q96PU9 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ODF3Q96PU9 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ODF3Q96PU9 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ODF3Q96PU9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ODF3Q96PU9 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ODF3Q96PU9 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.31■□□□□ 0.52
ODF3Q96PU9 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.31■□□□□ 0.52
ODF3Q96PU9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.31■□□□□ 0.52
ODF3Q96PU9 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.31■□□□□ 0.52
ODF3Q96PU9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.31■□□□□ 0.52
ODF3Q96PU9 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ODF3Q96PU9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.31■□□□□ 0.52
ODF3Q96PU9 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.3■□□□□ 0.52
ODF3Q96PU9 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ODF3Q96PU9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ODF3Q96PU9 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ODF3Q96PU9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
ODF3Q96PU9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ODF3Q96PU9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ODF3Q96PU9 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ODF3Q96PU9 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ODF3Q96PU9 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
ODF3Q96PU9 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ODF3Q96PU9 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ODF3Q96PU9 AC091060.1-201ENST00000623524 1766 ntBASIC18.29■□□□□ 0.52
ODF3Q96PU9 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.28■□□□□ 0.52
ODF3Q96PU9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ODF3Q96PU9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.28■□□□□ 0.52
ODF3Q96PU9 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.28■□□□□ 0.52
ODF3Q96PU9 AC145676.1-201ENST00000514988 2004 ntBASIC18.28■□□□□ 0.52
ODF3Q96PU9 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ODF3Q96PU9 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ODF3Q96PU9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.27■□□□□ 0.52
ODF3Q96PU9 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ODF3Q96PU9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.27■□□□□ 0.52
ODF3Q96PU9 AC148477.6-201ENST00000623746 465 ntBASIC18.27■□□□□ 0.52
ODF3Q96PU9 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ODF3Q96PU9 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ODF3Q96PU9 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ODF3Q96PU9 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ODF3Q96PU9 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ODF3Q96PU9 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ODF3Q96PU9 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ODF3Q96PU9 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ODF3Q96PU9 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ODF3Q96PU9 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ODF3Q96PU9 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.26■□□□□ 0.51
ODF3Q96PU9 DUX4L11-201ENST00000611504 1267 ntBASIC18.26■□□□□ 0.51
ODF3Q96PU9 DUX4L12-201ENST00000614593 1267 ntBASIC18.26■□□□□ 0.51
ODF3Q96PU9 DUX4L14-201ENST00000621227 1267 ntBASIC18.26■□□□□ 0.51
ODF3Q96PU9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ODF3Q96PU9 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.26■□□□□ 0.51
ODF3Q96PU9 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms