Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 AC044849.2-201ENST00000606596 710 ntBASIC21.55■■□□□ 1.04
FOXRED1Q96CU9 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
FOXRED1Q96CU9 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXRED1Q96CU9 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXRED1Q96CU9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.54■■□□□ 1.04
FOXRED1Q96CU9 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXRED1Q96CU9 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXRED1Q96CU9 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.54■■□□□ 1.04
FOXRED1Q96CU9 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXRED1Q96CU9 AC087741.3-201ENST00000624270 1347 ntBASIC21.54■■□□□ 1.04
FOXRED1Q96CU9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXRED1Q96CU9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.53■■□□□ 1.04
FOXRED1Q96CU9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.53■■□□□ 1.04
FOXRED1Q96CU9 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.52■■□□□ 1.04
FOXRED1Q96CU9 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXRED1Q96CU9 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXRED1Q96CU9 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
FOXRED1Q96CU9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.52■■□□□ 1.04
FOXRED1Q96CU9 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.52■■□□□ 1.04
FOXRED1Q96CU9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.52■■□□□ 1.04
FOXRED1Q96CU9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXRED1Q96CU9 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXRED1Q96CU9 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
FOXRED1Q96CU9 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FOXRED1Q96CU9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FOXRED1Q96CU9 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FOXRED1Q96CU9 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
FOXRED1Q96CU9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
FOXRED1Q96CU9 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
FOXRED1Q96CU9 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FOXRED1Q96CU9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.49■■□□□ 1.03
FOXRED1Q96CU9 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
FOXRED1Q96CU9 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
FOXRED1Q96CU9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
FOXRED1Q96CU9 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
FOXRED1Q96CU9 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
FOXRED1Q96CU9 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.49■■□□□ 1.03
FOXRED1Q96CU9 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
FOXRED1Q96CU9 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
FOXRED1Q96CU9 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
FOXRED1Q96CU9 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
FOXRED1Q96CU9 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.48■■□□□ 1.03
FOXRED1Q96CU9 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
FOXRED1Q96CU9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
FOXRED1Q96CU9 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
FOXRED1Q96CU9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.47■■□□□ 1.03
FOXRED1Q96CU9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
FOXRED1Q96CU9 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
FOXRED1Q96CU9 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXRED1Q96CU9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXRED1Q96CU9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
FOXRED1Q96CU9 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.46■■□□□ 1.03
FOXRED1Q96CU9 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXRED1Q96CU9 DUSP8P4-201ENST00000399538 1761 ntBASIC21.45■■□□□ 1.02
FOXRED1Q96CU9 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.45■■□□□ 1.02
FOXRED1Q96CU9 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXRED1Q96CU9 MIR6090-201ENST00000622481 60 ntBASIC21.44■■□□□ 1.02
FOXRED1Q96CU9 AC092803.2-201ENST00000564287 1899 ntBASIC21.43■■□□□ 1.02
FOXRED1Q96CU9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.43■■□□□ 1.02
FOXRED1Q96CU9 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.43■■□□□ 1.02
FOXRED1Q96CU9 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.43■■□□□ 1.02
FOXRED1Q96CU9 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXRED1Q96CU9 AP004609.3-201ENST00000610705 1884 ntBASIC21.43■■□□□ 1.02
FOXRED1Q96CU9 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.42■■□□□ 1.02
FOXRED1Q96CU9 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXRED1Q96CU9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.42■■□□□ 1.02
FOXRED1Q96CU9 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
FOXRED1Q96CU9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.41■■□□□ 1.02
FOXRED1Q96CU9 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXRED1Q96CU9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXRED1Q96CU9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
FOXRED1Q96CU9 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
FOXRED1Q96CU9 AC020928.2-201ENST00000588717 2197 ntBASIC21.39■■□□□ 1.01
FOXRED1Q96CU9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
FOXRED1Q96CU9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.39■■□□□ 1.01
FOXRED1Q96CU9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.39■■□□□ 1.01
FOXRED1Q96CU9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.39■■□□□ 1.01
FOXRED1Q96CU9 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXRED1Q96CU9 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.39■■□□□ 1.01
FOXRED1Q96CU9 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXRED1Q96CU9 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXRED1Q96CU9 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.38■■□□□ 1.01
FOXRED1Q96CU9 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
FOXRED1Q96CU9 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.38■■□□□ 1.01
FOXRED1Q96CU9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
FOXRED1Q96CU9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXRED1Q96CU9 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
FOXRED1Q96CU9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
FOXRED1Q96CU9 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
FOXRED1Q96CU9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
FOXRED1Q96CU9 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
FOXRED1Q96CU9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.36■■□□□ 1.01
FOXRED1Q96CU9 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.36■■□□□ 1.01
FOXRED1Q96CU9 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
FOXRED1Q96CU9 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
FOXRED1Q96CU9 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
FOXRED1Q96CU9 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
FOXRED1Q96CU9 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
FOXRED1Q96CU9 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
FOXRED1Q96CU9 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms