Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 AP004833.2-201ENST00000532228 1454 ntBASIC31.16■■■□□ 2.58
CNKSR1Q969H4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
CNKSR1Q969H4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CNKSR1Q969H4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC31.16■■■□□ 2.58
CNKSR1Q969H4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.15■■■□□ 2.58
CNKSR1Q969H4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CNKSR1Q969H4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC31.15■■■□□ 2.58
CNKSR1Q969H4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC31.15■■■□□ 2.58
CNKSR1Q969H4 AC093536.1-201ENST00000569153 554 ntBASIC31.15■■■□□ 2.58
CNKSR1Q969H4 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.15■■■□□ 2.58
CNKSR1Q969H4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CNKSR1Q969H4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
CNKSR1Q969H4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.14■■■□□ 2.58
CNKSR1Q969H4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CNKSR1Q969H4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC31.14■■■□□ 2.58
CNKSR1Q969H4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
CNKSR1Q969H4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC31.14■■■□□ 2.58
CNKSR1Q969H4 RAP2CP1-202ENST00000605179 643 ntBASIC31.14■■■□□ 2.58
CNKSR1Q969H4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
CNKSR1Q969H4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC31.13■■■□□ 2.57
CNKSR1Q969H4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC31.13■■■□□ 2.57
CNKSR1Q969H4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CNKSR1Q969H4 SPCS2P3-201ENST00000500401 656 ntBASIC31.12■■■□□ 2.57
CNKSR1Q969H4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CNKSR1Q969H4 KRT8P33-201ENST00000508125 1423 ntBASIC31.12■■■□□ 2.57
CNKSR1Q969H4 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CNKSR1Q969H4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
CNKSR1Q969H4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CNKSR1Q969H4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC31.11■■■□□ 2.57
CNKSR1Q969H4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CNKSR1Q969H4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC31.11■■■□□ 2.57
CNKSR1Q969H4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CNKSR1Q969H4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC31.1■■■□□ 2.57
CNKSR1Q969H4 AC009299.2-201ENST00000482477 511 ntBASIC31.1■■■□□ 2.57
CNKSR1Q969H4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC31.1■■■□□ 2.57
CNKSR1Q969H4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC31.09■■■□□ 2.57
CNKSR1Q969H4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CNKSR1Q969H4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
CNKSR1Q969H4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CNKSR1Q969H4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
CNKSR1Q969H4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC31.07■■■□□ 2.57
CNKSR1Q969H4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC31.07■■■□□ 2.57
CNKSR1Q969H4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CNKSR1Q969H4 AC139795.1-202ENST00000500444 432 ntBASIC31.07■■■□□ 2.56
CNKSR1Q969H4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC31.06■■■□□ 2.56
CNKSR1Q969H4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CNKSR1Q969H4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CNKSR1Q969H4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC31.06■■■□□ 2.56
CNKSR1Q969H4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
CNKSR1Q969H4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC31.06■■■□□ 2.56
CNKSR1Q969H4 MIR6765-201ENST00000614092 87 ntBASIC31.06■■■□□ 2.56
CNKSR1Q969H4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC31.06■■■□□ 2.56
CNKSR1Q969H4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
CNKSR1Q969H4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CNKSR1Q969H4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CNKSR1Q969H4 YBX1P4-201ENST00000392794 808 ntBASIC31.05■■■□□ 2.56
CNKSR1Q969H4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CNKSR1Q969H4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC31.05■■■□□ 2.56
CNKSR1Q969H4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.05■■■□□ 2.56
CNKSR1Q969H4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CNKSR1Q969H4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC31.04■■■□□ 2.56
CNKSR1Q969H4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CNKSR1Q969H4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC31.04■■■□□ 2.56
CNKSR1Q969H4 AC100797.4-201ENST00000631653 1827 ntBASIC31.03■■■□□ 2.56
CNKSR1Q969H4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CNKSR1Q969H4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CNKSR1Q969H4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC31.03■■■□□ 2.56
CNKSR1Q969H4 AC103834.1-201ENST00000520383 144 ntBASIC31.03■■■□□ 2.56
CNKSR1Q969H4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC31.03■■■□□ 2.56
CNKSR1Q969H4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC31.03■■■□□ 2.56
CNKSR1Q969H4 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CNKSR1Q969H4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CNKSR1Q969H4 HES6-204ENST00000409182 863 ntTSL 2 BASIC31.02■■■□□ 2.56
CNKSR1Q969H4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CNKSR1Q969H4 MIR3960-201ENST00000583311 91 ntBASIC31.02■■■□□ 2.56
CNKSR1Q969H4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CNKSR1Q969H4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
CNKSR1Q969H4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CNKSR1Q969H4 HYI-210ENST00000486909 905 ntTSL 5 BASIC31.01■■■□□ 2.55
CNKSR1Q969H4 AC019069.1-201ENST00000610008 1333 ntBASIC31■■■□□ 2.55
CNKSR1Q969H4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC31■■■□□ 2.55
CNKSR1Q969H4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC31■■■□□ 2.55
CNKSR1Q969H4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC31■■■□□ 2.55
CNKSR1Q969H4 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CNKSR1Q969H4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC30.99■■■□□ 2.55
CNKSR1Q969H4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
CNKSR1Q969H4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC30.98■■■□□ 2.55
CNKSR1Q969H4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CNKSR1Q969H4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC30.98■■■□□ 2.55
CNKSR1Q969H4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
CNKSR1Q969H4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.97■■■□□ 2.55
CNKSR1Q969H4 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
CNKSR1Q969H4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC30.97■■■□□ 2.55
CNKSR1Q969H4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC30.97■■■□□ 2.55
CNKSR1Q969H4 AC131212.1-201ENST00000613771 668 ntBASIC30.97■■■□□ 2.55
CNKSR1Q969H4 PVT1_1.1-201ENST00000615125 194 ntBASIC30.97■■■□□ 2.55
CNKSR1Q969H4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CNKSR1Q969H4 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC30.97■■■□□ 2.55
CNKSR1Q969H4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CNKSR1Q969H4 AC018755.3-202ENST00000596210 929 ntBASIC30.96■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms