Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
HMGCLL1Q8TB92 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
HMGCLL1Q8TB92 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
HMGCLL1Q8TB92 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.58■■□□□ 1.52
HMGCLL1Q8TB92 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
HMGCLL1Q8TB92 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.56■■□□□ 1.52
HMGCLL1Q8TB92 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
HMGCLL1Q8TB92 AC016575.1-201ENST00000607026 382 ntBASIC24.56■■□□□ 1.52
HMGCLL1Q8TB92 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.56■■□□□ 1.52
HMGCLL1Q8TB92 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.56■■□□□ 1.52
HMGCLL1Q8TB92 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.55■■□□□ 1.52
HMGCLL1Q8TB92 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
HMGCLL1Q8TB92 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
HMGCLL1Q8TB92 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
HMGCLL1Q8TB92 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
HMGCLL1Q8TB92 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
HMGCLL1Q8TB92 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
HMGCLL1Q8TB92 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
HMGCLL1Q8TB92 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.54■■□□□ 1.52
HMGCLL1Q8TB92 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
HMGCLL1Q8TB92 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.53■■□□□ 1.52
HMGCLL1Q8TB92 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
HMGCLL1Q8TB92 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
HMGCLL1Q8TB92 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.53■■□□□ 1.52
HMGCLL1Q8TB92 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
HMGCLL1Q8TB92 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.52■■□□□ 1.52
HMGCLL1Q8TB92 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
HMGCLL1Q8TB92 AC135731.1-201ENST00000569415 2548 ntBASIC24.52■■□□□ 1.52
HMGCLL1Q8TB92 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
HMGCLL1Q8TB92 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
HMGCLL1Q8TB92 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
HMGCLL1Q8TB92 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
HMGCLL1Q8TB92 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.51■■□□□ 1.51
HMGCLL1Q8TB92 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
HMGCLL1Q8TB92 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
HMGCLL1Q8TB92 MIR639-201ENST00000384974 98 ntBASIC24.5■■□□□ 1.51
HMGCLL1Q8TB92 AC008813.1-201ENST00000536597 885 ntBASIC24.5■■□□□ 1.51
HMGCLL1Q8TB92 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
HMGCLL1Q8TB92 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
HMGCLL1Q8TB92 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.49■■□□□ 1.51
HMGCLL1Q8TB92 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
HMGCLL1Q8TB92 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
HMGCLL1Q8TB92 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.49■■□□□ 1.51
HMGCLL1Q8TB92 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
HMGCLL1Q8TB92 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
HMGCLL1Q8TB92 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
HMGCLL1Q8TB92 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
HMGCLL1Q8TB92 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
HMGCLL1Q8TB92 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.48■■□□□ 1.51
HMGCLL1Q8TB92 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
HMGCLL1Q8TB92 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
HMGCLL1Q8TB92 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
HMGCLL1Q8TB92 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.47■■□□□ 1.51
HMGCLL1Q8TB92 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
HMGCLL1Q8TB92 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
HMGCLL1Q8TB92 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.46■■□□□ 1.51
HMGCLL1Q8TB92 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
HMGCLL1Q8TB92 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
HMGCLL1Q8TB92 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
HMGCLL1Q8TB92 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
HMGCLL1Q8TB92 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
HMGCLL1Q8TB92 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
HMGCLL1Q8TB92 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.45■■□□□ 1.5
HMGCLL1Q8TB92 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
HMGCLL1Q8TB92 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
HMGCLL1Q8TB92 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.44■■□□□ 1.5
HMGCLL1Q8TB92 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
HMGCLL1Q8TB92 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.44■■□□□ 1.5
HMGCLL1Q8TB92 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
HMGCLL1Q8TB92 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
HMGCLL1Q8TB92 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
HMGCLL1Q8TB92 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.43■■□□□ 1.5
HMGCLL1Q8TB92 AC018358.1-201ENST00000631079 1402 ntBASIC24.43■■□□□ 1.5
HMGCLL1Q8TB92 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
HMGCLL1Q8TB92 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
HMGCLL1Q8TB92 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.42■■□□□ 1.5
HMGCLL1Q8TB92 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
HMGCLL1Q8TB92 HLA-V-202ENST00000446817 847 ntBASIC24.41■■□□□ 1.5
HMGCLL1Q8TB92 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.41■■□□□ 1.5
HMGCLL1Q8TB92 AL449106.1-201ENST00000608517 1980 ntBASIC24.41■■□□□ 1.5
HMGCLL1Q8TB92 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.4■■□□□ 1.5
HMGCLL1Q8TB92 AC148477.6-201ENST00000623746 465 ntBASIC24.4■■□□□ 1.5
HMGCLL1Q8TB92 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
HMGCLL1Q8TB92 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
HMGCLL1Q8TB92 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
HMGCLL1Q8TB92 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
HMGCLL1Q8TB92 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
HMGCLL1Q8TB92 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
HMGCLL1Q8TB92 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.38■■□□□ 1.49
HMGCLL1Q8TB92 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.38■■□□□ 1.49
HMGCLL1Q8TB92 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
HMGCLL1Q8TB92 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
HMGCLL1Q8TB92 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
HMGCLL1Q8TB92 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
HMGCLL1Q8TB92 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.37■■□□□ 1.49
HMGCLL1Q8TB92 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.36■■□□□ 1.49
HMGCLL1Q8TB92 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
HMGCLL1Q8TB92 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
HMGCLL1Q8TB92 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
HMGCLL1Q8TB92 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms