Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C3orf56Q8N813 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C3orf56Q8N813 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.66■□□□□ 0.74
C3orf56Q8N813 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C3orf56Q8N813 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.66■□□□□ 0.74
C3orf56Q8N813 MIR6765-201ENST00000614092 87 ntBASIC19.66■□□□□ 0.74
C3orf56Q8N813 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C3orf56Q8N813 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
C3orf56Q8N813 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.66■□□□□ 0.74
C3orf56Q8N813 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
C3orf56Q8N813 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.65■□□□□ 0.74
C3orf56Q8N813 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
C3orf56Q8N813 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
C3orf56Q8N813 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.65■□□□□ 0.74
C3orf56Q8N813 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.65■□□□□ 0.74
C3orf56Q8N813 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
C3orf56Q8N813 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.64■□□□□ 0.73
C3orf56Q8N813 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.64■□□□□ 0.73
C3orf56Q8N813 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
C3orf56Q8N813 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
C3orf56Q8N813 AL359258.2-201ENST00000564063 1566 ntBASIC19.64■□□□□ 0.73
C3orf56Q8N813 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
C3orf56Q8N813 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
C3orf56Q8N813 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
C3orf56Q8N813 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
C3orf56Q8N813 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
C3orf56Q8N813 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
C3orf56Q8N813 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.63■□□□□ 0.73
C3orf56Q8N813 AC093536.1-201ENST00000569153 554 ntBASIC19.63■□□□□ 0.73
C3orf56Q8N813 AC018755.3-202ENST00000596210 929 ntBASIC19.63■□□□□ 0.73
C3orf56Q8N813 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
C3orf56Q8N813 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
C3orf56Q8N813 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
C3orf56Q8N813 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.62■□□□□ 0.73
C3orf56Q8N813 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
C3orf56Q8N813 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.62■□□□□ 0.73
C3orf56Q8N813 AL356441.2-201ENST00000443009 864 ntBASIC19.62■□□□□ 0.73
C3orf56Q8N813 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
C3orf56Q8N813 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.62■□□□□ 0.73
C3orf56Q8N813 AC103834.1-201ENST00000520383 144 ntBASIC19.62■□□□□ 0.73
C3orf56Q8N813 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
C3orf56Q8N813 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
C3orf56Q8N813 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
C3orf56Q8N813 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.61■□□□□ 0.73
C3orf56Q8N813 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
C3orf56Q8N813 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
C3orf56Q8N813 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.61■□□□□ 0.73
C3orf56Q8N813 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
C3orf56Q8N813 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.61■□□□□ 0.73
C3orf56Q8N813 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.61■□□□□ 0.73
C3orf56Q8N813 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
C3orf56Q8N813 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.6■□□□□ 0.73
C3orf56Q8N813 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
C3orf56Q8N813 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
C3orf56Q8N813 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.6■□□□□ 0.73
C3orf56Q8N813 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
C3orf56Q8N813 AC008406.3-201ENST00000620001 1374 ntBASIC19.59■□□□□ 0.73
C3orf56Q8N813 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
C3orf56Q8N813 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
C3orf56Q8N813 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
C3orf56Q8N813 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
C3orf56Q8N813 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
C3orf56Q8N813 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.59■□□□□ 0.73
C3orf56Q8N813 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
C3orf56Q8N813 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
C3orf56Q8N813 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
C3orf56Q8N813 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
C3orf56Q8N813 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
C3orf56Q8N813 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
C3orf56Q8N813 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
C3orf56Q8N813 SPCS2P3-201ENST00000500401 656 ntBASIC19.57■□□□□ 0.72
C3orf56Q8N813 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.57■□□□□ 0.72
C3orf56Q8N813 AL031848.2-201ENST00000607670 837 ntBASIC19.57■□□□□ 0.72
C3orf56Q8N813 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
C3orf56Q8N813 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.57■□□□□ 0.72
C3orf56Q8N813 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C3orf56Q8N813 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
C3orf56Q8N813 AC025884.2-201ENST00000553429 711 ntBASIC19.56■□□□□ 0.72
C3orf56Q8N813 MIR4508-201ENST00000584178 70 ntBASIC19.56■□□□□ 0.72
C3orf56Q8N813 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.56■□□□□ 0.72
C3orf56Q8N813 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.55■□□□□ 0.72
C3orf56Q8N813 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C3orf56Q8N813 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
C3orf56Q8N813 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.54■□□□□ 0.72
C3orf56Q8N813 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
C3orf56Q8N813 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
C3orf56Q8N813 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.54■□□□□ 0.72
C3orf56Q8N813 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
C3orf56Q8N813 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
C3orf56Q8N813 RAP2CP1-202ENST00000605179 643 ntBASIC19.54■□□□□ 0.72
C3orf56Q8N813 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
C3orf56Q8N813 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
C3orf56Q8N813 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
C3orf56Q8N813 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
C3orf56Q8N813 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
C3orf56Q8N813 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
C3orf56Q8N813 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
C3orf56Q8N813 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.53■□□□□ 0.72
C3orf56Q8N813 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.53■□□□□ 0.72
C3orf56Q8N813 MIR3960-201ENST00000583311 91 ntBASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms